Christian Schwantes
Christian Schwantes
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MDTraj: a modern open library for the analysis of molecular dynamics trajectories
RT McGibbon, KA Beauchamp, MP Harrigan, C Klein, JM Swails, ...
Biophysical journal 109 (8), 1528-1532, 2015
Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus
RN Harris, RM Brucker, JB Walke, MH Becker, CR Schwantes, ...
The ISME journal 3 (7), 818-824, 2009
Improvements in Markov state model construction reveal many non-native interactions in the folding of NTL9
CR Schwantes, VS Pande
Journal of chemical theory and computation 9 (4), 2000-2009, 2013
Amphibian Chemical Defense: Antifungal Metabolites of the Microsymbiont Janthinobacterium lividum on the Salamander Plethodon cinereus
RM Brucker, RN Harris, CR Schwantes, TN Gallaher, DC Flaherty, ...
Journal of chemical ecology 34, 1422-1429, 2008
MSMBuilder: statistical models for biomolecular dynamics
MP Harrigan, MM Sultan, CX Hernández, BE Husic, P Eastman, ...
Biophysical journal 112 (1), 10-15, 2017
The bacterially produced metabolite violacein is associated with survival of amphibians infected with a lethal fungus
MH Becker, RM Brucker, CR Schwantes, RN Harris, KPC Minbiole
Applied and environmental microbiology 75 (21), 6635-6638, 2009
Towards a better understanding of the use of probiotics for preventing chytridiomycosis in Panamanian golden frogs
MH Becker, RN Harris, KPC Minbiole, CR Schwantes, LA Rollins-Smith, ...
Ecohealth 8, 501-506, 2011
Modeling molecular kinetics with tICA and the kernel trick
CR Schwantes, VS Pande
Journal of chemical theory and computation 11 (2), 600-608, 2015
Perspective: Markov models for long-timescale biomolecular dynamics
CR Schwantes, RT McGibbon, VS Pande
The Journal of chemical physics 141 (9), 09B201_1, 2014
Bicephalic amphiphile architecture affects antibacterial activity
JE LaDow, DC Warnock, KM Hamill, KL Simmons, RW Davis, ...
European journal of medicinal chemistry 46 (9), 4219-4226, 2011
Complex pathways in folding of protein G explored by simulation and experiment
LJ Lapidus, S Acharya, CR Schwantes, L Wu, D Shukla, M King, ...
Biophysical journal 107 (4), 947-955, 2014
Markov state models and tICA reveal a nonnative folding nucleus in simulations of NuG2
CR Schwantes, D Shukla, VS Pande
Biophysical journal 110 (8), 1716-1719, 2016
Dynamical phase transitions reveal amyloid-like states on protein folding landscapes
JK Weber, RL Jack, CR Schwantes, VS Pande
Biophysical journal 107 (4), 974-982, 2014
Statistical model selection for Markov models of biomolecular dynamics
RT McGibbon, CR Schwantes, VS Pande
The Journal of Physical Chemistry B 118 (24), 6475-6481, 2014
Probing the origins of two-state folding
TJ Lane, CR Schwantes, KA Beauchamp, VS Pande
The Journal of Chemical Physics 139 (14), 10B610_1, 2013
Atomistic structural ensemble refinement reveals non-native structure stabilizes a sub-millisecond folding intermediate of CheY
J Shi, RP Nobrega, C Schwantes, SV Kathuria, O Bilsel, CR Matthews, ...
Scientific reports 7 (1), 1-13, 2017
MDTraj: a modern, open library for the analysis of molecular dynamics trajectories MDTraj: a modern, open library for the analysis of molecular dynamics trajectories
RT Mcgibbon, KA Beauchamp, CR Schwantes, L Wang, CX Hern, ...
Biorxiv. Org 109, 0-2, 2014
Binned kernels for anomaly detection in multi-timescale data using Gaussian processes
M Adelsberg, C Schwantes
KDD 2017 Workshop on Anomaly Detection in Finance, 102-113, 2018
An Investigation of Inital Shock Cell Formation in Turbulent Coanda Wall Jets
CP Lubert, CR Schwantes, RJ Shafer
Automated Construction of Order Parameters for Analyzing Simulations of Protein Folding and Water Dynamics
CR Schwantes
Stanford University, 2015
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