Handuo Shi
Handuo Shi
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A comprehensive, CRISPR-based functional analysis of essential genes in bacteria
JM Peters, A Colavin, H Shi, TL Czarny, MH Larson, S Wong, JS Hawkins, ...
Cell 165 (6), 1493-1506, 2016
Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway
HA Sutterlin, H Shi, KL May, A Miguel, S Khare, KC Huang, TJ Silhavy
Proceedings of the National Academy of Sciences 113 (11), E1565-E1574, 2016
How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction
H Shi, BP Bratton, Z Gitai, KC Huang
Cell 172 (6), 1294-1305, 2018
Monoclonal antibody targeting the β-barrel assembly machine of Escherichia coli is bactericidal
KM Storek, MR Auerbach, H Shi, NK Garcia, D Sun, NN Nickerson, R Vij, ...
Proceedings of the National Academy of Sciences 115 (14), 3692-3697, 2018
Quantum cloning machines and the applications
H Fan, YN Wang, L Jing, JD Yue, HD Shi, YL Zhang, LZ Mu
Physics Reports 544 (3), 241-322, 2014
Rapid, precise quantification of bacterial cellular dimensions across a genomic-scale knockout library
T Ursell, TK Lee, D Shiomi, H Shi, C Tropini, RD Monds, A Colavin, ...
BMC biology 15 (1), 1-15, 2017
Deep phenotypic mapping of bacterial cytoskeletal mutants reveals physiological robustness to cell size
H Shi, A Colavin, M Bigos, C Tropini, RD Monds, KC Huang
Current Biology 27 (22), 3419-3429. e4, 2017
RodZ modulates geometric localization of the bacterial actin MreB to regulate cell shape
A Colavin, H Shi, KC Huang
Nature communications 9 (1), 1280, 2018
Single-molecule imaging reveals modulation of cell wall synthesis dynamics in live bacterial cells
TK Lee, K Meng, H Shi, KC Huang
Nature communications 7 (1), 13170, 2016
Klebsiella michiganensis transmission enhances resistance to Enterobacteriaceae gut invasion by nutrition competition
RA Oliveira, KM Ng, MB Correia, V Cabral, H Shi, JL Sonnenburg, ...
Nature microbiology 5 (4), 630-641, 2020
Programming a Pavlovian-like conditioning circuit in Escherichia coli
H Zhang, M Lin, H Shi, W Ji, L Huang, X Zhang, S Shen, R Gao, S Wu, ...
Nature communications 5 (1), 3102, 2014
A formalized design process for bacterial consortia that perform logic computing
W Ji, H Shi, H Zhang, R Sun, J Xi, D Wen, J Feng, Y Chen, X Qin, Y Ma, ...
PLoS One 8 (2), e57482, 2013
Strain Library Imaging Protocol for high-throughput, automated single-cell microscopy of large bacterial collections arrayed on multiwell plates
H Shi, A Colavin, TK Lee, KC Huang
Nature protocols 12 (2), 429-438, 2017
Automated design of genetic toggle switches with predetermined bistability
S Chen, H Zhang, H Shi, W Ji, J Feng, Y Gong, Z Yang, Q Ouyang
ACS synthetic Biology 1 (7), 284-290, 2012
Unified universal quantum cloning machine and fidelities
YN Wang, HD Shi, ZX Xiong, L Jing, XJ Ren, LZ Mu, H Fan
Physical Review A 84 (3), 034302, 2011
Chiral twisting in a bacterial cytoskeletal polymer affects filament size and orientation
H Shi, DA Quint, GM Grason, A Gopinathan, KC Huang
Nature communications 11 (1), 1408, 2020
The inner membrane protein YhdP modulates the rate of anterograde phospholipid flow in Escherichia coli
J Grimm, H Shi, W Wang, AM Mitchell, NS Wingreen, KC Huang, ...
Proceedings of the National Academy of Sciences 117 (43), 26907-26914, 2020
Starvation induces shrinkage of the bacterial cytoplasm
H Shi, CS Westfall, J Kao, PD Odermatt, SE Anderson, S Cesar, M Sievert, ...
Proceedings of the National Academy of Sciences 118 (24), e2104686118, 2021
General quantum key distribution in higher dimension
ZX Xiong, HD Shi, YN Wang, L Jing, J Lei, LZ Mu, H Fan
Physical Review A 85 (1), 012334, 2012
Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments
H Shi, Y Hu, PD Odermatt, CG Gonzalez, L Zhang, JE Elias, F Chang, ...
Nature communications 12 (1), 1975, 2021
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