Predrag Radivojac
Predrag Radivojac
Professor of Computer Science, Northeastern University
Patvirtintas el. paštas - Pagrindinis puslapis
REVEL: an ensemble method for predicting the pathogenicity of rare missense variants
NM Ioannidis, JH Rothstein, V Pejaver, S Middha, SK McDonnell, ...
The American Journal of Human Genetics 99 (4), 877-885, 2016
The importance of intrinsic disorder for protein phosphorylation
LM Iakoucheva, P Radivojac, CJ Brown, TR O’Connor, JG Sikes, ...
Nucleic Acids Research 32 (3), 1037-1049, 2004
A large-scale evaluation of computational protein function prediction
P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ...
Nature Methods 10 (3), 221–227, 2013
Length-dependent prediction of protein intrinsic disorder
K Peng, P Radivojac, S Vucetic, AK Dunker, Z Obradovic
BMC Bioinformatics 7 (1), 208, 2006
Automated inference of molecular mechanisms of disease from amino acid substitutions
B Li, VG Krishnan, ME Mort, F Xin, KK Kamati, DN Cooper, SD Mooney, ...
Bioinformatics 25 (21), 2744-2750, 2009
Analysis of molecular recognition features (MoRFs)
A Mohan, CJ Oldfield, P Radivojac, V Vacic, MS Cortese, AK Dunker, ...
Journal of Molecular Biology 362 (5), 1043-1059, 2006
Intrinsic disorder and functional proteomics
P Radivojac, LM Iakoucheva, CJ Oldfield, Z Obradovic, VN Uversky, ...
Biophysical Journal 92 (5), 1439-1456, 2007
Identification, analysis, and prediction of protein ubiquitination sites
P Radivojac, V Vacic, C Haynes, RR Cocklin, A Mohan, JW Heyen, ...
Proteins: Structure, Function, and Bioinformatics 78 (2), 365-380, 2010
Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes
C Haynes, CJ Oldfield, F Ji, N Klitgord, ME Cusick, P Radivojac, ...
PLoS Computational Biology 2 (8), e100, 2006
Exploiting heterogeneous sequence properties improves prediction of protein disorder
Z Obradovic, K Peng, S Vucetic, P Radivojac, AK Dunker
Proteins: Structure, Function, and Bioinformatics 61 (S7), 176-182, 2005
Inferring the molecular and phenotypic impact of amino acid variants with MutPred2
V Pejaver, J Urresti, J Lugo-Martinez, KA Pagel, GN Lin, HJ Nam, M Mort, ...
Nature Communications 11, 5918, 2020
Predicting intrinsic disorder from amino acid sequence
Z Obradovic, K Peng, S Vucetic, P Radivojac, CJ Brown, AK Dunker
Proteins: Structure, Function, and Bioinformatics 53 (S6), 566-572, 2003
Optimizing long intrinsic disorder predictors with protein evolutionary information
K Peng, S Vucetic, P Radivojac, CJ Brown, AK Dunker, Z Obradovic
Journal of Bioinformatics and Computational Biology 3 (1), 35-60, 2005
Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms
PR Romero, S Zaidi, YY Fang, VN Uversky, P Radivojac, CJ Oldfield, ...
Proceedings of the National Academy of Sciences 103 (22), 8390-8395, 2006
Characterization of molecular recognition features, MoRFs, and their binding partners
V Vacic, CJ Oldfield, A Mohan, P Radivojac, MS Cortese, VN Uversky, ...
Journal of Proteome Research 6 (6), 2351-2366, 2007
Two Sample Logo: a graphical representation of the differences between two sets of sequence alignments
V Vacic, LM Iakoucheva, P Radivojac
Bioinformatics 22 (12), 1536-1537, 2006
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D'Andrea, R Lepore, ...
Genome Biology 17 (1), 184, 2016
Protein flexibility and intrinsic disorder
P Radivojac, Z Obradovic, DK Smith, G Zhu, S Vucetic, CJ Brown, ...
Protein Science 13 (1), 71-80, 2004
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome Biology 20 (1), 244, 2019
The structural and functional signatures of proteins that undergo multiple events of post‐translational modification
V Pejaver, WL Hsu, F Xin, AK Dunker, VN Uversky, P Radivojac
Protein Science 23 (8), 1077-1093, 2014
Sistema negali atlikti operacijos. Bandykite vėliau dar kartą.
Straipsniai 1–20