| YeastFab: the design and construction of standard biological parts for metabolic engineering in Saccharomyces cerevisiae Y Guo, J Dong, T Zhou, J Auxillos, T Li, W Zhang, L Wang, Y Shen, Y Luo, ... Nucleic acids research 43 (13), e88-e88, 2015 | 120 | 2015 |
| EMMA: An extensible mammalian modular assembly toolkit for the rapid design and production of diverse expression vectors A Martella, M Matjusaitis, J Auxillos, SM Pollard, Y Cai ACS synthetic biology 6 (7), 1380-1392, 2017 | 70 | 2017 |
| Standardization of Synthetic Biology Tools and Assembly Methods for Saccharomyces cerevisiae and Emerging Yeast Species K Malcı, E Watts, TM Roberts, JY Auxillos, B Nowrouzi, HO Boll, ... ACS Synthetic Biology 11 (8), 2527-2547, 2022 | 29 | 2022 |
| Multiplex Genome Engineering for Optimizing Bioproduction in Saccharomyces cerevisiae JY Auxillos, E Garcia-Ruiz, S Jones, T Li, S Jiang, J Dai, Y Cai Biochemistry 58 (11), 1492-1500, 2019 | 10 | 2019 |
| YeastFab: High-Throughput Genetic Parts Construction, Measurement, and Pathway Engineering in Yeast E Garcia-Ruiz, J Auxillos, T Li, J Dai, Y Cai Methods in Enzymology 608, 277-306, 2018 | 9 | 2018 |
| Multiplexed activation in mammalian cells using a split-intein CRISPR/Cas12a based synthetic transcription factor JW Bryson, JY Auxillos, SJ Rosser Nucleic acids research 50 (1), 549-560, 2022 | 8 | 2022 |
| SCRaMbLE-in: A fast and efficient method to diversify and improve the yields of heterologous pathways in synthetic yeast R Swidah, J Auxillos, W Liu, S Jones, TF Chan, J Dai, Y Cai DNA Cloning and Assembly: Methods and Protocols, 305-327, 2020 | 3 | 2020 |
| Limitations of composability of cis-regulatory elements in messenger RNA S Haynes, J Auxillos, W Danecka, A Jain, C Alibert, E Wallace bioRxiv, 2021.08. 12.455418, 2021 | | 2021 |
