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| The nf-core framework for community-curated bioinformatics pipelines PA Ewels, A Peltzer, S Fillinger, H Patel, J Alneberg, A Wilm, MU Garcia, ... Nature biotechnology 38 (3), 276-278, 2020 | 1088 | 2020 |
| Metagenome-assembled genomes uncover a global brackish microbiome LW Hugerth, J Larsson, J Alneberg, MV Lindh, C Legrand, J Pinhassi, ... Genome biology 16, 1-18, 2015 | 208 | 2015 |
| DESMAN: a new tool for de novo extraction of strains from metagenomes C Quince, TO Delmont, S Raguideau, J Alneberg, AE Darling, G Collins, ... Genome biology 18, 1-22, 2017 | 179 | 2017 |
| Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes J Alneberg, CMG Karlsson, AM Divne, C Bergin, F Homa, MV Lindh, ... Microbiome 6, 1-14, 2018 | 134 | 2018 |
| Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation O Svartström, J Alneberg, N Terrapon, V Lombard, I de Bruijn, J Malmsten, ... The ISME journal 11 (11), 2538-2551, 2017 | 131 | 2017 |
| Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems YOO Hu, N Ndegwa, J Alneberg, S Johansson, JB Logue, M Huss, ... Scientific reports 8 (1), 11907, 2018 | 33 | 2018 |
| Coupling biogeochemical process rates and metagenomic blueprints of coastal bacterial assemblages in the context of environmental change T Markussen, EM Happel, JE Teikari, V Huchaiah, J Alneberg, ... Environmental microbiology 20 (8), 3083-3099, 2018 | 10 | 2018 |
