Rodrigo Ochoa
Rodrigo Ochoa
Postdoctoral Research Fellow, Boehringer Ingelheim, Biberach, Germany
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Cited by
Cited by
Drug search for leishmaniasis: a virtual screening approach by grid computing
R Ochoa, SJ Watowich, A Flórez, CV Mesa, SM Robledo, C Muskus
Journal of computer-aided molecular design 30, 541-552, 2016
Anti-herpetic, anti-dengue and antineoplastic activities of simple and heterocycle-fused derivatives of terpenyl-1, 4-naphthoquinone and 1, 4-anthraquinone
VC Roa-Linares, Y Miranda-Brand, V Tangarife-Castaño, R Ochoa, ...
Molecules 24 (7), 1279, 2019
Predicting the affinity of peptides to major histocompatibility complex class II by scoring molecular dynamics simulations
R Ochoa, A Laio, P Cossio
Journal of Chemical Information and Modeling 59 (8), 3464-3473, 2019
myChEMBL: a virtual machine implementation of open data and cheminformatics tools
R Ochoa, M Davies, G Papadatos, F Atkinson, JP Overington
Bioinformatics 30 (2), 298-300, 2014
Assessing the capability of in silico mutation protocols for predicting the finite temperature conformation of amino acids
R Ochoa, MA Soler, A Laio, P Cossio
Physical Chemistry Chemical Physics 20 (40), 25901-25909, 2018
Repurposing of known drugs for leishmaniasis treatment using bioinformatic predictions, in vitro validations and pharmacokinetic simulations
C Bustamante, R Ochoa, C Asela, C Muskus
Journal of Computer-Aided Molecular Design 33, 845-854, 2019
Toxic Activity, Molecular Modeling and Docking Simulations of Bacillus thuringiensis Cry11 Toxin Variants Obtained via DNA Shuffling
AM Florez, MO Suarez-Barrera, GM Morales, KV Rivera, S Orduz, ...
Frontiers in Microbiology 9, 2461, 2018
Perspectives for the structure-based design of acetylcholinesterase reactivators
R Ochoa, CA Rodriguez, AF Zuluaga
Journal of Molecular Graphics and Modelling, 2016
MyChEMBL: a virtual platform for distributing cheminformatics tools and open data
M Davies, M Nowotka, G Papadatos, F Atkinson, GJP Van Westen, ...
Challenges 5 (2), 334-337, 2014
The Akt-like kinase of Leishmania panamensis: As a new molecular target for drug discovery
D Tirado-Duarte, M Marín-Villa, R Ochoa, G Blandón-Fuentes, MJ Soares, ...
Acta tropica 177, 171-178, 2018
PARCE: Protocol for amino acid refinement through computational evolution
R Ochoa, MA Soler, A Laio, P Cossio
Computer Physics Communications 260, 107716, 2021
In silico screening of potential drug with antileishmanial activity and validation of their activity by in vitro and in vivo studies
CV Mesa, GA Blandón, DL Muñoz, CE Muskus, AF Flórez, R Ochoa, ...
J Chem Chem Eng 9, 375-402, 2015
Furanchalcone–biphenyl hybrids: synthesis, in silico studies, antitrypanosomal and cytotoxic activities
E García, R Ochoa, I Vásquez, L Conesa-Milián, M Carda, A Yepes, ...
Medicinal Chemistry Research 28, 608-622, 2019
In silico search of inhibitors of Streptococcus mutans for the control of dental plaque
R Ochoa, MC Martínez-Pabón, MA Arismendi-Echeverri, ...
Archives of oral biology 83, 68-75, 2017
Application of ensemble pharmacophore-based virtual screening to the discovery of novel antimitotic tubulin inhibitors
L Gallego-Yerga, R Ochoa, I Lans, C Peña-Varas, M Alegría-Arcos, ...
Computational and Structural Biotechnology Journal 19, 4360-4372, 2021
Multiple-allele MHC class II epitope engineering by a molecular dynamics-based evolution protocol
R Ochoa, VAS Lunardelli, DS Rosa, A Laio, P Cossio
Frontiers in Immunology 13, 862851, 2022
Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
R Ochoa, C Rocha-Roa, M Marín-Villa, SM Robledo, RE Varela-M
International Journal of Molecular Sciences 19 (12), 3951, 2018
Selection Pressure in CD8+ T-cell Epitopes in the pol Gene of HIV-1 Infected Individuals in Colombia. A Bioinformatic Approach
L Acevedo-Sáenz, R Ochoa, MT Rugeles, P Olaya-García, ...
Viruses 7 (3), 1313-1331, 2015
dockECR: Open consensus docking and ranking protocol for virtual screening of small molecules
R Ochoa, K Palacio-Rodriguez, CM Clemente, NS Adler
Journal of Molecular Graphics and Modelling 109, 108023, 2021
Virtual and experimental screening of phenylfuranchalcones as potential anti-Leishmania candidates
R Ochoa, E García, SM Robledo
Journal of Molecular Graphics and Modelling 91, 164-171, 2019
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