| On the dielectric “constant” of proteins: smooth dielectric function for macromolecular modeling and its implementation in DelPhi L Li, C Li, Z Zhang, E Alexov Journal of chemical theory and computation 9 (4), 2126-2136, 2013 | 585 | 2013 |
| DelPhi: a comprehensive suite for DelPhi software and associated resources L Li, C Li, S Sarkar, J Zhang, S Witham, Z Zhang, L Wang, N Smith, ... BMC biophysics 5, 1-11, 2012 | 378 | 2012 |
| Structural and physico-chemical effects of disease and non-disease nsSNPs on proteins TG Kucukkal, M Petukh, L Li, E Alexov Current opinion in structural biology 32, 18-24, 2015 | 212 | 2015 |
| Community-wide assessment of protein-interface modeling suggests improvements to design methodology SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ... Journal of molecular biology 414 (2), 289-302, 2011 | 158 | 2011 |
| pKa predictions for proteins, RNAs, and DNAs with the Gaussian dielectric function using DelPhi pKa L Wang, L Li, E Alexov Proteins: Structure, Function, and Bioinformatics 83 (12), 2186-2197, 2015 | 128 | 2015 |
| Spike proteins of SARS-CoV and SARS-CoV-2 utilize different mechanisms to bind with human ACE2 Y Xie, CB Karki, D Du, H Li, J Wang, A Sobitan, S Teng, Q Tang, L Li Frontiers in molecular biosciences 7, 591873, 2020 | 106 | 2020 |
| Predicting protein–DNA binding free energy change upon missense mutations using modified MM/PBSA approach: SAMPDI webserver Y Peng, L Sun, Z Jia, L Li, E Alexov Bioinformatics 34 (5), 779-786, 2018 | 73 | 2018 |
| A novel protocol for three-dimensional structure prediction of RNA-protein complexes Y Huang, S Liu, D Guo, L Li, Y Xiao Scientific reports 3 (1), 1887, 2013 | 72 | 2013 |
| DelPhi web server v2: incorporating atomic-style geometrical figures into the computational protocol N Smith, S Witham, S Sarkar, J Zhang, L Li, C Li, E Alexov Bioinformatics 28 (12), 1655-1657, 2012 | 58 | 2012 |
| Highly efficient and exact method for parallelization of grid‐based algorithms and its implementation in DelPhi C Li, L Li, J Zhang, E Alexov Journal of computational chemistry 33 (24), 1960-1966, 2012 | 55 | 2012 |
| DelPhi suite: new developments and review of functionalities C Li, Z Jia, A Chakravorty, S Pahari, Y Peng, S Basu, M Koirala, ... Journal of computational chemistry 40 (28), 2502-2508, 2019 | 54 | 2019 |
| DelPhiForce, a tool for electrostatic force calculations: Applications to macromolecular binding L Li, A Chakravorty, E Alexov Journal of computational chemistry 38 (9), 584-593, 2017 | 52 | 2017 |
| On the modeling of polar component of solvation energy using smooth Gaussian-based dielectric function L Li, C Li, E Alexov Journal of Theoretical and Computational Chemistry 13 (03), 1440002, 2014 | 51 | 2014 |
| Progress in developing Poisson-Boltzmann equation solvers C Li, L Li, M Petukh, E Alexov Computational and Mathematical Biophysics 1 (2013), 42-62, 2013 | 47 | 2013 |
| DelPhiForce web server: electrostatic forces and energy calculations and visualization L Li, Z Jia, Y Peng, A Chakravorty, L Sun, E Alexov Bioinformatics 33 (22), 3661-3663, 2017 | 46 | 2017 |
| ASPDock: protein-protein docking algorithm using atomic solvation parameters model L Li, D Guo, Y Huang, S Liu, Y Xiao BMC bioinformatics 12, 1-9, 2011 | 46 | 2011 |
| Cytoplasmic dynein binding, run length, and velocity are guided by long-range electrostatic interactions L Li, J Alper, E Alexov Scientific reports 6 (1), 31523, 2016 | 45 | 2016 |
| On the energy components governing molecular recognition in the framework of continuum approaches L Li, L Wang, E Alexov Frontiers in molecular biosciences 2, 5, 2015 | 38 | 2015 |
| Predicting nonspecific ion binding using DelPhi M Petukh, M Zhenirovskyy, C Li, L Li, L Wang, E Alexov Biophysical journal 102 (12), 2885-2893, 2012 | 38 | 2012 |
| Dg-labeler and dgl-mots dataset: Boost the autonomous driving perception Y Cui, Z Cao, Y Xie, X Jiang, F Tao, YV Chen, L Li, D Liu Proceedings of the IEEE/CVF Winter Conference on Applications of Computer …, 2022 | 36 | 2022 |
Emil AlexovClemson UniversityVerified email at g.clemson.edu
