| The adaptive biasing force method: Everything you always wanted to know but were afraid to ask J Comer, JC Gumbart, J Hénin, T Lelièvre, A Pohorille, C Chipot The Journal of Physical Chemistry B 119 (3), 1129-1151, 2015 | 498 | 2015 |
| Assessing graphene nanopores for sequencing DNA DB Wells, M Belkin, J Comer, A Aksimentiev Nano letters 12 (8), 4117-4123, 2012 | 339 | 2012 |
| Simulation-based approaches for determining membrane permeability of small compounds CT Lee, J Comer, C Herndon, N Leung, A Pavlova, RV Swift, C Tung, ... Journal of chemical information and modeling 56 (4), 721-733, 2016 | 223 | 2016 |
| Detection of DNA sequences using an alternating electric field in a nanopore capacitor G Sigalov, J Comer, G Timp, A Aksimentiev Nano letters 8 (1), 56-63, 2008 | 221 | 2008 |
| Nanopore sequencing: electrical measurements of the code of life W Timp, UM Mirsaidov, D Wang, J Comer, A Aksimentiev, G Timp IEEE transactions on nanotechnology 9 (3), 281-294, 2010 | 156 | 2010 |
| DNA base-calling from a nanopore using a Viterbi algorithm W Timp, J Comer, A Aksimentiev Biophysical journal 102 (10), L37-L39, 2012 | 123 | 2012 |
| Predicting the DNA sequence dependence of nanopore ion current using atomic-resolution Brownian dynamics J Comer, A Aksimentiev The Journal of Physical Chemistry C 116 (5), 3376-3393, 2012 | 118 | 2012 |
| Paclitaxel-PHBV nanoparticles and their toxicity to endometrial and primary ovarian cancer cells C Vilos, FA Morales, PA Solar, NS Herrera, FD Gonzalez-Nilo, DA Aguayo, ... Biomaterials 34 (16), 4098-4108, 2013 | 117 | 2013 |
| Microscopic mechanics of hairpin DNA translocation through synthetic nanopores J Comer, V Dimitrov, Q Zhao, G Timp, A Aksimentiev Biophysical Journal 96 (2), 593-608, 2009 | 105 | 2009 |
| Predicting adsorption affinities of small molecules on carbon nanotubes using molecular dynamics simulation J Comer, R Chen, H Poblete, A Vergara-Jaque, JE Riviere ACS nano 9 (12), 11761-11774, 2015 | 102 | 2015 |
| Dangerous liaisons between detergents and membrane proteins. The case of mitochondrial uncoupling protein 2 M Zoonens, J Comer, S Masscheleyn, E Pebay-Peyroula, C Chipot, ... Journal of the American Chemical Society 135 (40), 15174-15182, 2013 | 101 | 2013 |
| Computationally efficient methodology for atomic-level characterization of dendrimer–drug complexes: a comparison of amine-and acetyl-terminated PAMAM A Vergara-Jaque, J Comer, L Monsalve, FD Gonzalez-Nilo, C Sandoval The Journal of Physical Chemistry B 117 (22), 6801-6813, 2013 | 100 | 2013 |
| Slowing the translocation of double-stranded DNA using a nanopore smaller than the double helix U Mirsaidov, J Comer, V Dimitrov, A Aksimentiev, G Timp Nanotechnology 21 (39), 395501, 2010 | 99 | 2010 |
| Lipid bilayer coated Al2O3 nanopore sensors: towards a hybrid biological solid-state nanopore BM Venkatesan, J Polans, J Comer, S Sridhar, D Wendell, A Aksimentiev, ... Biomedical microdevices 13, 671-682, 2011 | 89 | 2011 |
| Multiple-replica strategies for free-energy calculations in NAMD: Multiple-walker adaptive biasing force and walker selection rules J Comer, JC Phillips, K Schulten, C Chipot Journal of chemical theory and computation 10 (12), 5276-5285, 2014 | 84 | 2014 |
| Molecular determinants of phosphatidylinositol 4, 5-bisphosphate (PI (4, 5) P2) binding to transient receptor potential V1 (TRPV1) channels H Poblete, I Oyarzún, P Olivero, J Comer, M Zuñiga, RV Sepulveda, ... Journal of Biological Chemistry 290 (4), 2086-2098, 2015 | 83 | 2015 |
| New insights into peptide–silver nanoparticle interaction: deciphering the role of cysteine and lysine in the peptide sequence H Poblete, A Agarwal, SS Thomas, C Bohne, R Ravichandran, J Phopase, ... Langmuir 32 (1), 265-273, 2016 | 82 | 2016 |
| Close encounters with DNA C Maffeo, J Yoo, J Comer, DB Wells, B Luan, A Aksimentiev Journal of Physics: Condensed Matter 26 (41), 413101, 2014 | 81 | 2014 |
| Calculating position-dependent diffusivity in biased molecular dynamics simulations J Comer, C Chipot, FD González-Nilo Journal of chemical theory and computation 9 (2), 876-882, 2013 | 79 | 2013 |
| Stretching and unzipping nucleic acid hairpins using a synthetic nanopore Q Zhao, J Comer, V Dimitrov, S Yemenicioglu, A Aksimentiev, G Timp Nucleic Acids Research 36 (5), 1532-1541, 2008 | 77 | 2008 |
Aleksei AksimentievUniversity of Illinois at Urbana-ChampaignVerified email at illinois.edu
