| GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit S Pronk, S Páll, R Schulz, P Larsson, P Bjelkmar, R Apostolov, MR Shirts, ... Bioinformatics 29 (7), 845-854, 2013 | 7530 | 2013 |
| Gromacs user manual E Apol, R Apostolov, HJ Berendsen, A Van Buuren, P Bjelkmar, ... Royal Institute of Technology and Uppsala University, Sweden, 1991 | 63 | 1991 |
| Application of MDGRAPE‐3, a special purpose board for molecular dynamics simulations, to periodic biomolecular systems G Kikugawa, R Apostolov, N Kamiya, M Taiji, R Himeno, H Nakamura, ... Journal of Computational Chemistry 30 (1), 110-118, 2009 | 55 | 2009 |
| Sharing data from molecular simulations M Abraham, R Apostolov, J Barnoud, P Bauer, C Blau, AMJJ Bonvin, ... Journal of chemical information and modeling 59 (10), 4093-4099, 2019 | 36 | 2019 |
| GROMACS user manual version 4.5. 4 E Apol, R Apostolov, H Berendsen, A Van Buuren, P Bjelkmar, ... Royal Institute of Technology and Uppsala University, Stockholm, 2010 | 34 | 2010 |
| Association Dynamics and Linear and Nonlinear Optical Properties of an N-Acetylaladanamide Probe in a POPC Membrane NA Murugan, R Apostolov, Z Rinkevicius, J Kongsted, E Lindahl, H Ågren Journal of the American Chemical Society 135 (36), 13590-13597, 2013 | 29 | 2013 |
| An efficient and extensible format, library, and API for binary trajectory data from molecular simulations M Lundborg, R Apostolov, D Spångberg, A Gärdenäs, D van der Spoel, ... Journal of computational chemistry 35 (3), 260-269, 2014 | 24 | 2014 |
| Scaling of the GROMACS 4.6 molecular dynamics code on SuperMUC C Kutzner, R Apostolov, B Hess, H Grubmüller Parallel computing: Accelerating computational science and engineering (CSE …, 2014 | 24 | 2014 |
| GROMACS-4.5. 4 Sweden. 2001–2010 E Apol, R Apostolov, HJC Berendsen | 21 | |
| Membrane attachment facilitates ligand access to the active site in monoamine oxidase A R Apostolov, Y Yonezawa, DM Standley, G Kikugawa, Y Takano, ... Biochemistry 48 (25), 5864-5873, 2009 | 19 | 2009 |
| Molecular dynamics simulation of amorphous poly (3-hexylthiophene) FD Tsourtou, LD Peristeras, R Apostolov, VG Mavrantzas Macromolecules 53 (18), 7810-7824, 2020 | 17 | 2020 |
| The C-terminal cavity of the Na, K-ATPase analyzed by docking and electrophysiology PA Paulsen, W Jurkowski, R Apostolov, E Lindahl, P Nissen, H Poulsen Molecular membrane biology 30 (2), 195-205, 2013 | 9 | 2013 |
| MEDIATE-Molecular DockIng at homE: Turning collaborative simulations into therapeutic solutions G Vistoli, C Manelfi, C Talarico, A Fava, A Warshel, IV Tetko, R Apostolov, ... Expert Opinion on Drug Discovery 18 (8), 821-833, 2023 | 4 | 2023 |
| ScalaLife: scalable software services for Life Science R Apostolov, L Axner, H Agren, E Ayugade, M Duta, JL Gelpi, J Gimenez, ... Proceedings of the 9th HealthGrid Conference, 2011 | 3 | 2011 |
| Rethinking Electrostatic Solvers in Particle Simulations for the Exascale Era S Markidis, G Lapenta, R Apostolov, E Laure arXiv preprint arXiv:1205.2217, 2012 | 1 | 2012 |
| Rethinking Electrostatic Solvers in Particle Simulations for the Exascale Era J Deca, S Markidis, G Lapenta, E Járleberg, R Apostolov, E Laure APS Division of Plasma Physics Meeting Abstracts 54, NP8. 050, 2012 | | 2012 |
| PRACE Autumn School 2012-ScalaLife GROMACS R Apostolov | | 2012 |
| Molecular Dynamics Simulations on GPUs R Apostolov, S Pall | | 2009 |
| A computational study of the dynamical properties and structural determinants for function of monoamine oxidase A RP Apostolov 大阪大学, 2008 | | 2008 |
| 1P118 A Computational Study of Monoamine Oxidase A Dynamics (Membrane proteins, Poster Presentations) R Apostolov, Y Yonezawa, H Nakamura Seibutsu Butsuri 47 (supplement), S53, 2007 | | 2007 |
