The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains SC Soares, A Silva, E Trost, J Blom, R Ramos, A Carneiro, A Ali, ... PLoS One 8 (1), e53818, 2013 | 139 | 2013 |
GIPSy: genomic island prediction software SC Soares, H Geyik, RTJ Ramos, PHCG de Sá, EGV Barbosa, ... Journal of Biotechnology 232, 2-11, 2016 | 138 | 2016 |
Genetic variation influencing DNA methylation provides insights into molecular mechanisms regulating genomic function JS Hawe, R Wilson, KT Schmid, L Zhou, LN Lakshmanan, BC Lehne, ... Nature genetics 54 (1), 18-29, 2022 | 83 | 2022 |
Metagenomic evidence for the presence of phototrophic G emmatimonadetes bacteria in diverse environments Y Zeng, J Baumbach, EGV Barbosa, V Azevedo, C Zhang, M Koblížek Environmental microbiology reports 8 (1), 139-149, 2016 | 79 | 2016 |
KeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape N Alcaraz, J Pauling, R Batra, E Barbosa, A Junge, AGL Christensen, ... BMC systems biology 8, 1-6, 2014 | 71 | 2014 |
Campylobacter fetus subspecies: Comparative genomics and prediction of potential virulence targets A Ali, SC Soares, AR Santos, LC Guimarães, E Barbosa, SS Almeida, ... Gene 508 (2), 145-156, 2012 | 68 | 2012 |
Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production SC Soares, E Trost, RTJ Ramos, AR Carneiro, AR Santos, AC Pinto, ... Journal of biotechnology 167 (2), 135-141, 2013 | 65 | 2013 |
Genome sequence of Exiguobacterium antarcticum B7, isolated from a biofilm in Ginger Lake, King George Island, Antarctica AR Carneiro, RTJ Ramos, H Dall'Agnol, AC Pinto, S de Castro Soares, ... Journal of bacteriology 194 (23), 6689-6690, 2012 | 65 | 2012 |
Complete genome sequence of Corynebacterium pseudotuberculosis strain Cp267, isolated from a llama T Lopes, A Silva, R Thiago, A Carneiro, FA Dorella, FS Rocha, ... Journal of bacteriology 194 (13), 3567-3568, 2012 | 38 | 2012 |
Genome Sequence of Lactococcus lactis subsp. lactis NCDO 2118, a GABA-Producing Strain LC Oliveira, TDL Saraiva, SC Soares, RTJ Ramos, PHCG Sá, ... Genome announcements 2 (5), 10.1128/genomea. 00980-14, 2014 | 36 | 2014 |
The Corynebacterium pseudotuberculosis in silico predicted pan-exoproteome AR Santos, A Carneiro, A Gala-García, A Pinto, D Barh, E Barbosa, ... BMC genomics 13, 1-12, 2012 | 31 | 2012 |
Orthologous proteins of experimental de-and remyelination are differentially regulated in the CSF proteome of multiple sclerosis subtypes NA Martin, A Nawrocki, V Molnar, ML Elkjaer, EK Thygesen, M Palkovits, ... PloS one 13 (8), e0202530, 2018 | 30 | 2018 |
Whole-genome sequence of Corynebacterium pseudotuberculosis PAT10 strain isolated from sheep in Patagonia, Argentina LT Cerdeira, AC Pinto, MPC Schneider, SS de Almeida, AR Dos Santos, ... Journal of bacteriology 193 (22), 6420-6421, 2011 | 30 | 2011 |
Mature Epitope Density-A strategy for target selection based on immunoinformatics and exported prokaryotic proteins AR Santos, VB Pereira, E Barbosa, J Baumbach, J Pauling, R Röttger, ... BMC genomics 14, 1-11, 2013 | 27 | 2013 |
PANNOTATOR: an automated tool for annotation of pan-genomes AR Santos, E Barbosa, K Fiaux, M Zurita-Turk, V Chaitankar, ... Genet Mol Res 12 (3), 2982-2989, 2013 | 27 | 2013 |
Complete Genome Sequences of VA Miyoshi, MC Fontaine, FSR Ramos, MPC Schneider, AFA Dorella, ... J. Bacteriol 194 (17), 4736, 2012 | 27 | 2012 |
Microbial comparative genomics: an overview of tools and insights into the genus Corynebacterium A Ali, SC Soares, E Barbosa, AR Santos, D Barh, SM Bakhtiar, S Hassan, ... J Bacteriol Parasitol 4 (167), 2, 2013 | 26 | 2013 |
Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya LT Cerdeira, MPC Schneider, AC Pinto, SS de Almeida, AR dos Santos, ... Journal of Bacteriology 193 (24), 7025-7026, 2011 | 26 | 2011 |
Whole-genome sequence of Corynebacterium pseudotuberculosis strain Cp162, isolated from camel SS Hassan, MPC Schneider, RTJ Ramos, AR Carneiro, A Ranieri, ... Journal of bacteriology 194 (20), 5718-5719, 2012 | 25 | 2012 |
Complete genome sequence of Corynebacterium pseudotuberculosis Cp31, isolated from an Egyptian buffalo A Silva, RTJ Ramos, A Ribeiro Carneiro, A Cybelle Pinto, ... Journal of bacteriology 194 (23), 6663-6664, 2012 | 23 | 2012 |