Congestion phenomena on complex networks D De Martino, L Dall’Asta, G Bianconi, M Marsili Physical Review E 79 (1), 015101, 2009 | 152 | 2009 |
An introduction to the maximum entropy approach and its application to inference problems in biology A De Martino, D De Martino Heliyon 4 (4), 2018 | 94 | 2018 |
Uniform sampling of steady states in metabolic networks: heterogeneous scales and rounding D De Martino, M Mori, V Parisi PloS one 10 (4), e0122670, 2015 | 62 | 2015 |
Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks D De Martino, F Capuani, M Mori, A De Martino, E Marinari Metabolites 3 (4), 946-966, 2013 | 57 | 2013 |
Growth against entropy in bacterial metabolism: the phenotypic trade-off behind empirical growth rate distributions in E. coli D De Martino, F Capuani, A De Martino Physical biology 13 (3), 036005, 2016 | 50 | 2016 |
Statistical mechanics for metabolic networks during steady state growth D De Martino, A Mc Andersson, T Bergmiller, CC Guet, G Tkačik Nature communications 9 (1), 2988, 2018 | 46 | 2018 |
A scalable algorithm to explore the Gibbs energy landscape of genome-scale metabolic networks D De Martino, M Figliuzzi, A De Martino, E Marinari PLoS computational biology 8 (6), e1002562, 2012 | 42 | 2012 |
Dynamic facilitation picture of a higher-order glass singularity M Sellitto, D De Martino, F Caccioli, JJ Arenzon Physical review letters 105 (26), 265704, 2010 | 36 | 2010 |
Phase transitions in crowd dynamics of resource allocation A Ghosh, D De Martino, A Chatterjee, M Marsili, BK Chakrabarti Physical Review E 85 (2), 021116, 2012 | 26 | 2012 |
A minimal model for congestion phenomena on complex networks D De Martino, L Dall’Asta, G Bianconi, M Marsili Journal of Statistical Mechanics: Theory and Experiment 2009 (08), P08023, 2009 | 26 | 2009 |
Quantifying the entropic cost of cellular growth control D De Martino, F Capuani, A De Martino Physical Review E 96 (1), 010401, 2017 | 22 | 2017 |
Thermodynamics of biochemical networks and duality theorems D De Martino Physical Review E 87 (5), 052108, 2013 | 21 | 2013 |
Shear-and vibration-induced order-disorder transitions in granular media M Pica Ciamarra, A Coniglio, D De Martino, M Nicodemi The European Physical Journal E 24, 411-415, 2007 | 18 | 2007 |
Quantitative constraint-based computational model of tumor-to-stroma coupling via lactate shuttle F Capuani, D De Martino, E Marinari, A De Martino Scientific reports 5 (1), 11880, 2015 | 17 | 2015 |
Identifying all moiety conservation laws in genome-scale metabolic networks A De Martino, D De Martino, R Mulet, A Pagnani PloS one 9 (7), e100750, 2014 | 13 | 2014 |
Relationship between fitness and heterogeneity in exponentially growing microbial populations AP Muntoni, A Braunstein, A Pagnani, D De Martino, A De Martino Biophysical Journal 121 (10), 1919-1930, 2022 | 11 | 2022 |
Unbiased metabolic flux inference through combined thermodynamic and 13C flux analysis J Saldida, AP Muntoni, D de Martino, G Hubmann, B Niebel, AM Schmidt, ... bioRxiv, 2020.06. 29.177063, 2020 | 10 | 2020 |
Reaction networks as systems for resource allocation: A variational principle for their non-equilibrium steady states A De Martino, D De Martino, R Mulet, G Uguzzoni PloS one 7 (7), e39849, 2012 | 10 | 2012 |
Asymptotic analysis of noisy fitness maximization, applied to metabolism & growth D De Martino, D Masoero Journal of Statistical Mechanics: Theory and Experiment 2016 (12), 123502, 2016 | 9 | 2016 |
Feedback-induced self-oscillations in large interacting systems subjected to phase transitions D De Martino Journal of Physics A: Mathematical and Theoretical 52 (4), 045002, 2019 | 8 | 2019 |