Methylation-dependent loss of RIP3 expression in cancer represses programmed necrosis in response to chemotherapeutics GB Koo, MJ Morgan, DG Lee, WJ Kim, JH Yoon, JS Koo, SI Kim, SJ Kim, ... Cell research 25 (6), 707-725, 2015 | 461 | 2015 |
The dual epigenetic role of PRMT5 in acute myeloid leukemia: gene activation and repression via histone arginine methylation SS Tarighat, R Santhanam, D Frankhouser, HS Radomska, H Lai, ... Leukemia 30 (4), 789-799, 2016 | 164 | 2016 |
Epigenetics meets genetics in acute myeloid leukemia: clinical impact of a novel seven-gene score G Marcucci, P Yan, K Maharry, D Frankhouser, D Nicolet, KH Metzeler, ... Journal of Clinical Oncology 32 (6), 548, 2014 | 158 | 2014 |
Preclinical investigation of the novel histone deacetylase inhibitor AR-42 in the treatment of cancer-induced cachexia YC Tseng, SK Kulp, IL Lai, EC Hsu, WA He, DE Frankhouser, PS Yan, ... Journal of the National Cancer Institute 107 (12), djv274, 2015 | 118 | 2015 |
Genome-wide methylation profiling in decitabine-treated patients with acute myeloid leukemia P Yan, D Frankhouser, M Murphy, HH Tam, B Rodriguez, J Curfman, ... Blood, The Journal of the American Society of Hematology 120 (12), 2466-2474, 2012 | 104 | 2012 |
Prognostic and biologic significance of DNMT3B expression in older patients with cytogenetically normal primary acute myeloid leukemia C Niederwieser, J Kohlschmidt, S Volinia, SP Whitman, KH Metzeler, ... Leukemia 29 (3), 567-575, 2015 | 84 | 2015 |
Mathematical deconvolution of CAR T-cell proliferation and exhaustion from real-time killing assay data P Sahoo, X Yang, D Abler, D Maestrini, V Adhikarla, D Frankhouser, ... Journal of the Royal Society Interface 17 (162), 20190734, 2020 | 67 | 2020 |
Quality control for RNA-Seq (QuaCRS): an integrated quality control pipeline KW Kroll, NE Mokaram, AR Pelletier, DE Frankhouser, MS Westphal, ... Cancer informatics 13, CIN. S14022, 2014 | 65 | 2014 |
State-transition analysis of time-sequential gene expression identifies critical points that predict development of acute myeloid leukemia RC Rockne, S Branciamore, J Qi, DE Frankhouser, D O'Meally, WK Hua, ... Cancer research 80 (15), 3157-3169, 2020 | 27 | 2020 |
Methylomic correlates of autophagy activity in cystic fibrosis K Caution, A Pan, K Krause, A Badr, K Hamilton, A Vaidya, H Gosu, ... Journal of Cystic Fibrosis 18 (4), 491-500, 2019 | 25 | 2019 |
Methods for high-throughput MethylCap-Seq data analysis BAT Rodriguez, D Frankhouser, M Murphy, M Trimarchi, HH Tam, ... BMC genomics 13, 1-11, 2012 | 22 | 2012 |
Statistical methods for detecting differentially methylated regions based on MethylCap-seq data DN Ayyala, DE Frankhouser, JO Ganbat, G Marcucci, R Bundschuh, ... Briefings in Bioinformatics 17 (6), 926-937, 2016 | 19 | 2016 |
PrEMeR-CG: inferring nucleotide level DNA methylation values from MethylCap-seq data DE Frankhouser, M Murphy, JS Blachly, J Park, MW Zoller, JO Ganbat, ... Bioinformatics 30 (24), 3567-3574, 2014 | 18 | 2014 |
Enrichment-based DNA methylation analysis using next-generation sequencing: sample exclusion, estimating changes in global methylation, and the contribution of replicate lanes MP Trimarchi, M Murphy, D Frankhouser, BAT Rodriguez, J Curfman, ... BMC genomics 13, 1-8, 2012 | 17 | 2012 |
Treatment-induced arteriolar revascularization and miR-126 enhancement in bone marrow niche protect leukemic stem cells in AML B Zhang, LXT Nguyen, D Zhao, DE Frankhouser, H Wang, DH Hoang, ... Journal of Hematology & Oncology 14, 1-19, 2021 | 15 | 2021 |
Toward personalized therapy in AML: in vivo benefit of targeting aberrant epigenetics in MLL-PTD-associated AML KM Bernot, RF Siebenaler, SP Whitman, NA Zorko, GG Marcucci, ... Leukemia 27 (12), 2379-2382, 2013 | 15 | 2013 |
Comparison of Insertional RNA Editing in Myxomycetes C Chen, D Frankhouser, R Bundschuh PLoS Computational Biology 8 (2), e1002400, 2012 | 15 | 2012 |
Acquired miR-142 deficit in leukemic stem cells suffices to drive chronic myeloid leukemia into blast crisis B Zhang, D Zhao, F Chen, D Frankhouser, H Wang, KV Pathak, L Dong, ... Nature Communications 14 (1), 5325, 2023 | 14 | 2023 |
Roadmap on plasticity and epigenetics in cancer J Foo, D Basanta, RC Rockne, C Strelez, C Shah, K Ghaffarian, ... Physical biology 19 (3), 031501, 2022 | 12 | 2022 |
SMaSH: Sample matching using SNPs in humans M Westphal, D Frankhouser, C Sonzone, PG Shields, P Yan, ... BMC genomics 20, 1-10, 2019 | 11 | 2019 |