Kinase associated-1 domains drive MARK/PAR1 kinases to membrane targets by binding acidic phospholipids K Moravcevic, JM Mendrola, KR Schmitz, YH Wang, D Slochower, ... Cell 143 (6), 966-977, 2010 | 193 | 2010 |
Overview of the SAMPL5 host–guest challenge: Are we doing better? J Yin, NM Henriksen, DR Slochower, MR Shirts, MW Chiu, DL Mobley, ... Journal of computer-aided molecular design 31, 1-19, 2017 | 192 | 2017 |
Escaping atom types in force fields using direct chemical perception DL Mobley, CC Bannan, A Rizzi, CI Bayly, JD Chodera, VT Lim, NM Lim, ... Journal of chemical theory and computation 14 (11), 6076-6092, 2018 | 174 | 2018 |
The SAMPL6 SAMPLing challenge: assessing the reliability and efficiency of binding free energy calculations A Rizzi, T Jensen, DR Slochower, M Aldeghi, V Gapsys, D Ntekoumes, ... Journal of computer-aided molecular design 34 (5), 601-633, 2020 | 113 | 2020 |
Polyelectrolyte properties of filamentous biopolymers and their consequences in biological fluids PA Janmey, DR Slochower, YH Wang, Q Wen, A Cēbers Soft matter 10 (10), 1439-1449, 2014 | 113 | 2014 |
Transmembrane orientation and possible role of the fusogenic peptide from parainfluenza virus 5 (PIV5) in promoting fusion JE Donald, Y Zhang, G Fiorin, V Carnevale, DR Slochower, F Gai, ... Proceedings of the National Academy of Sciences 108 (10), 3958-3963, 2011 | 81 | 2011 |
Open collaborative writing with Manubot DS Himmelstein, V Rubinetti, DR Slochower, D Hu, VS Malladi, ... PLoS computational biology 15 (6), e1007128, 2019 | 67 | 2019 |
Counterion-mediated cluster formation by polyphosphoinositides YH Wang, DR Slochower, PA Janmey Chemistry and physics of lipids 182, 38-51, 2014 | 60 | 2014 |
Quantum and all-atom molecular dynamics simulations of protonation and divalent ion binding to phosphatidylinositol 4, 5-bisphosphate (PIP2) DR Slochower, PJ Huwe, R Bradley, R Radhakrishnan, PA Janmey Biophysical Journal 104 (2), 79a, 2013 | 55 | 2013 |
The SAMPL5 host–guest challenge: computing binding free energies and enthalpies from explicit solvent simulations by the attach-pull-release (APR) method J Yin, NM Henriksen, DR Slochower, MK Gilson Journal of computer-aided molecular design 31, 133-145, 2017 | 48 | 2017 |
Counterion-mediated pattern formation in membranes containing anionic lipids DR Slochower, YH Wang, RW Tourdot, R Radhakrishnan, PA Janmey Advances in colloid and interface science 208, 177-188, 2014 | 44 | 2014 |
Binding thermodynamics of Host–Guest Systems with SMIRNOFF99Frosst 1.0. 5 from the open force field initiative DR Slochower, NM Henriksen, LP Wang, JD Chodera, DL Mobley, ... Journal of chemical theory and computation 15 (11), 6225-6242, 2019 | 37 | 2019 |
Optimization of coded aperture radioscintigraphy for sentinel lymph node mapping H Fujii, JD Idoine, S Gioux, R Accorsi, DR Slochower, RC Lanza, ... Molecular imaging and biology 14, 173-182, 2012 | 26 | 2012 |
Divalent cations bind to phosphoinositides to induce ion and isomer specific propensities for nano-cluster initiation in bilayer membranes RP Bradley, DR Slochower, PA Janmey, R Radhakrishnan Royal Society Open Science 7 (5), 192208, 2020 | 25 | 2020 |
Motor-like properties of nonmotor enzymes DR Slochower, MK Gilson Biophysical Journal 114 (9), 2174-2179, 2018 | 24 | 2018 |
Salmon-derived thrombin inhibits development of chronic pain through an endothelial barrier protective mechanism dependent on APC JR Smith, PA Galie, DR Slochower, CL Weisshaar, PA Janmey, ... Biomaterials 80, 96-105, 2016 | 22 | 2016 |
Physical chemistry and membrane properties of two phosphatidylinositol bisphosphate isomers DR Slochower, YH Wang, R Radhakrishnan, PA Janmey Physical Chemistry Chemical Physics 17 (19), 12608-12615, 2015 | 17 | 2015 |
Experimental characterization of the association of β-cyclodextrin and eight novel cyclodextrin derivatives with two guest compounds K Kellett, DR Slochower, M Schauperl, BM Duggan, MK Gilson Journal of computer-aided molecular design 35, 95-104, 2021 | 11 | 2021 |
Tuning Potential Functions to Host–Guest Binding Data J Setiadi, S Boothroyd, DR Slochower, DL Dotson, MW Thompson, ... Journal of Chemical Theory and Computation 20 (1), 239-252, 2023 | 6 | 2023 |
Experimental characterization of the association of nine novel cyclodextrin derivatives with two guest compounds K Kellett, D Slochower, M Schauperl, BM Duggan, M Gilson | 2 | 2020 |