Yansheng Liu
Yansheng Liu
Yale University School of Medicine
Verified email at - Homepage
Cited by
Cited by
On the dependency of cellular protein levels on mRNA abundance
Y Liu, A Beyer, R Aebersold
Cell 165 (3), 535-550, 2016
Integrated proteogenomic characterization of HBV-related hepatocellular carcinoma
Q Gao, H Zhu, L Dong, W Shi, R Chen, Z Song, C Huang, J Li, X Dong, ...
Cell 179 (2), 561-577. e22, 2019
Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry
BC Collins, CL Hunter, Y Liu, B Schilling, G Rosenberger, SL Bader, ...
Nature communications 8 (1), 291, 2017
A repository of assays to quantify 10,000 human proteins by SWATH-MS
G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ...
Scientific data 1 (1), 1-15, 2014
Quantitative variability of 342 plasma proteins in a human twin population
Y Liu, A Buil, BC Collins, LCJ Gillet, LC Blum, LY Cheng, O Vitek, ...
Molecular systems biology 11 (2), 786, 2015
Multi-omic measurements of heterogeneity in HeLa cells across laboratories
Y Liu, Y Mi, T Mueller, S Kreibich, EG Williams, A Van Drogen, C Borel, ...
Nature biotechnology 37 (3), 314-322, 2019
Protein kinase D at the Golgi controls NLRP3 inflammasome activation
Z Zhang, G Meszaros, W He, Y Xu, H de Fatima Magliarelli, L Mailly, ...
Journal of Experimental Medicine 214 (9), 2671-2693, 2017
Quantitative measurements of N‐linked glycoproteins in human plasma by SWATH‐MS
Y Liu, R Hüttenhain, S Surinova, LCJ Gillet, J Mouritsen, R Brunner, ...
Proteomics 13 (8), 1247-1256, 2013
Using data‐independent, high‐resolution mass spectrometry in protein biomarker research: perspectives and clinical applications
T Sajic, Y Liu, R Aebersold
PROTEOMICS–Clinical Applications 9 (3-4), 307-321, 2015
Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses
G Rosenberger, I Bludau, U Schmitt, M Heusel, CL Hunter, Y Liu, ...
Nature methods 14 (9), 921-927, 2017
Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor …
Y Liu, J Chen, A Sethi, QK Li, L Chen, B Collins, LCJ Gillet, B Wollscheid, ...
Molecular & Cellular Proteomics 13 (7), 1753-1768, 2014
TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics
HL Röst, Y Liu, G D'Agostino, M Zanella, P Navarro, G Rosenberger, ...
Nature methods 13 (9), 777-783, 2016
Impact of alternative splicing on the human proteome
Y Liu, M Gonzàlez-Porta, S Santos, A Brazma, JC Marioni, R Aebersold, ...
Cell reports 20 (5), 1229-1241, 2017
A class of environmental and endogenous toxins induces BRCA2 haploinsufficiency and genome instability
SLW Tan, S Chadha, Y Liu, E Gabasova, D Perera, K Ahmed, ...
Cell 169 (6), 1105-1118. e15, 2017
Mass spectrometric protein maps for biomarker discovery and clinical research
Y Liu, R Hüttenhain, B Collins, R Aebersold
Expert review of molecular diagnostics 13 (8), 811-825, 2013
Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS
G Rosenberger, Y Liu, HL Röst, C Ludwig, A Buil, A Bensimon, M Soste, ...
Nature biotechnology 35 (8), 781-788, 2017
Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells
Y Liu, C Borel, L Li, T Müller, EG Williams, PL Germain, M Buljan, T Sajic, ...
Nature communications 8 (1), 1212, 2017
Prediction of colorectal cancer diagnosis based on circulating plasma proteins
S Surinova, M Choi, S Tao, PJ Schüffler, CY Chang, T Clough, K Vysloužil, ...
EMBO molecular medicine 7 (9), 1166-1178, 2015
Strategies to enable large-scale proteomics for reproducible research
RC Poulos, PG Hains, R Shah, N Lucas, D Xavier, SS Manda, A Anees, ...
Nature communications 11 (1), 3793, 2020
NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses
S Wang, W Li, L Hu, J Cheng, H Yang, Y Liu
Nucleic acids research 48 (14), e83-e83, 2020
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