Luis M. Rocha

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Rion Brattig CorreiaInstituto Gulbenkian de Ciência / CAPES FoundationVerified email at indiana.edu
Andreas RechtsteinerScientist, Bioinformatics, MCD Biology, UCSCVerified email at ucsc.edu
Johan BollenProfessor of Informatics and Cognitive Science, Indiana UniversityVerified email at indiana.edu
Alaa Abi-HaidarI2D3 . LIP6. UPMC . CNRS . Paris, FranceVerified email at alahay.org
Alexander J GatesAssistant Professor, School of Data Science, University of VirginiaVerified email at virginia.edu
Lang LiThe Ohio State University, College of MedicineVerified email at osumc.edu
Cliff A JoslynChief Knowledge ScientistVerified email at pnnl.gov
Tiago SimasU-TAD - Centro Universitario de Tecnologia y Arte DigitalVerified email at u-tad.com
Artemy KolchinskyUniversitat Pompeu FabraVerified email at upf.edu
Michael E. WallResearch Scientist, Los Alamos National LaboratoryVerified email at lanl.gov
Manuel PitaAssistant Professor of Informatics. Universidade Lusófona, CICANT.Verified email at ulusofona.pt
Filippo MenczerLuddy Distinguished Professor of Informatics and Computer Science, Indiana UniversityVerified email at indiana.edu
Jasleen KaurSchool of Informatics & Computing, Indiana University BloomingtonVerified email at umail.iu.edu
Chien HuangVerified email at nuk.edu.tw
Karin VerspoorExecutive Dean, School of Computing Technologies, RMIT UniversityVerified email at rmit.edu.au
Alessandro FlamminiIndiana University - School of Informatics, Computing and EngineeringVerified email at indiana.edu
Prashant ShiralkarApplied Science Manager, QualtricsVerified email at qualtrics.com
Heng-Yi Michael WuBiology Research AI Development (BRAID) team, gRED GenentechVerified email at gene.com
Ana Gabriela MaguitmanUniversidad Nacional del Sur - CONICET - ArgentinaVerified email at cs.uns.edu.ar
Giovanni Luca CiampagliaUniversity of Maryland, College ParkVerified email at umd.edu

Luis M. Rocha

George J. Klir Professor of Systems Science and Industrial Engineering, Binghamton University (SUNY)

Verified email at binghamton.edu - Homepage

Complex systems computational biology artificial life computational intelligence cognitive science


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Singular value decomposition and principal component analysis ME Wall, A Rechtsteiner, LM Rocha A practical approach to microarray data analysis, 91-109, 2003	2283*	2003
Computational fact checking from knowledge networks GL Ciampaglia, P Shiralkar, LM Rocha, J Bollen, F Menczer, A Flammini PLoS ONE 10 (6), e0128193. doi:10.1371/journal.pon, 2015	662	2015
Selected self-organization and the semiotics of evolutionary systems LM Rocha Evolutionary systems: Biological and epistemological perspectives on …, 1998	201	1998
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ... BMC bioinformatics 12, 1-31, 2011	196	2011
Control of complex networks requires both structure and dynamics AJ Gates, LM Rocha Scientific Reports 6 (24456), doi:10.1038/srep24456, 2016	154	2016
Monitoring Potential Drug Interactions and Reactions via Network Analysis of Instagram User Timelines RB Correia, L Li, LM Rocha Pacific Symposium on Biocomputing 21, 492-503, 2016	115*	2016
Towards semiotic agent-based models of socio-technical organizations C Joslyn, L Rocha Proc. AI, Simulation and Planning in High Autonomy Systems (AIS 2000 …, 2000	114	2000
Complex systems modeling: Using metaphors from nature in simulation and scientific models LM Rocha BITS: Computer and Communications News, 1999	91*	1999
Eigenbehavior and symbols LM Rocha Systems Research 13 (3), 371-384, 1996	83	1996
Symbiotic Intelligence: self-organizing knowledge on distributed networks driven by human interaction N Johnson, S Rasmussen, C Joslyn, L Rocha, S Smith, M Kantor Proceedings of the 6th International Conference on Artificial Life, 403-407, 1998	81	1998
Mining social media data for biomedical signals and health-related behavior RB Correia, IB Wood, J Bollen, LM Rocha Annual Review of Biomedical Data Science 3 (1), 433-458, 2020	79	2020
Evolution with material symbol systems LM Rocha Biosystems 60 (1-3), 95-121, 2001	77	2001
Material representations: from the genetic code to the evolution of cellular automata LM Rocha, W Hordijk Artificial life 11 (1-2), 189-214, 2005	69	2005
The effective graph reveals redundancy, canalization, and control pathways in biochemical regulation and signaling LMR Alexander J. Gates, Rion Brattig Correia, Xuan Wang Proceedings of the National Academy of Sciences 118 (12), e2022598118, 2021	65	2021
Evidence Sets and Contextual Genetic Algorithms: Exploring uncertainty, context, and embodiment in cognitive and biological systems LM Rocha State University of New York at Binghamton, 1997	64	1997
Canalization and control in automata networks: body segmentation in Drosophila melanogaster M Marques-Pita, LM Rocha PloS one 8 (3), e55946, 2013	63	2013
Distance Closures on Complex Networks T Simas, LM Rocha Network Science 3 (2), 227-268. doi:10.1017/nws.201, 2015	61	2015
An integrated pharmacokinetics ontology and corpus for text mining HY Wu, S Karnik, A Subhadarshini, Z Wang, S Philips, X Han, C Chiang, ... BMC bioinformatics 14, 1-15, 2013	58	2013
Contextual genetic algorithms: evolving developmental rules LM Rocha European Conference on Artificial Life, 368-382, 1995	55*	1995
Evaluation of the host transcriptional response to human cytomegalovirus infection JF Challacombe, A Rechtsteiner, R Gottardo, LM Rocha, EP Browne, ... Physiological genomics 18 (1), 51-62, 2004	53	2004

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