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Luís Borges-Araújo
Luís Borges-Araújo
Post-doctoral researcher, CNRS
Verified email at ibcp.fr
Title
Cited by
Cited by
Year
Improved parameterization of phosphatidylinositide lipid headgroups for the Martini 3 coarse-grain force field
L Borges-Araújo, PCT Souza, F Fernandes, MN Melo
Journal of Chemical Theory and Computation 18 (1), 357-373, 2021
322021
Structure and lateral organization of phosphatidylinositol 4, 5-bisphosphate
L Borges-Araújo, F Fernandes
Molecules 25 (17), 3885, 2020
162020
Martini 3 Coarse-Grained Force Field for Cholesterol
L Borges-Araújo, AC Borges-Araújo, TN Ozturk, DP Ramirez-Echemendia, ...
Journal of Chemical Theory and Computation 19 (20), 7387-7404, 2023
122023
Pragmatic coarse-graining of proteins: models and applications
L Borges-Araújo, I Patmanidis, AP Singh, LHS Santos, AK Sieradzan, ...
Journal of Chemical Theory and Computation 19 (20), 7112-7135, 2023
122023
SARS-CoV-2 variants impact RBD conformational dynamics and ACE2 accessibility
M Valério, L Borges-Araújo, MN Melo, D Lousa, CM Soares
Frontiers in medical technology 4, 1009451, 2022
112022
OLIVES: A Go-like Model for Stabilizing Protein Structure via Hydrogen Bonding Native Contacts in the Martini 3 Coarse-Grained Force Field
KB Pedersen, L Borges-Araújo, AD Stange, PCT Souza, SJ Marrink, ...
62023
Expulsion mechanism of the substrate-translocating subunit in ECF transporters
C Thangaratnarajah, M Nijland, L Borges-Araújo, A Jeucken, ...
Nature Communications 14 (1), 4484, 2023
62023
Acyl-chain saturation regulates the order of phosphatidylinositol 4, 5-bisphosphate nanodomains
L Borges-Araújo, MM Domingues, A Fedorov, NC Santos, MN Melo, ...
Communications Chemistry 4 (1), 164, 2021
62021
Assessing the martini 3 protein model: A review of its path and potential
L Borges-Araújo, GP Pereira, M Valério, PCT Souza
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, 141014, 2024
12024
GōMartini 3: From large conformational changes in proteins to environmental bias corrections
PCT Souza, LP Borges Araujo, C Brasnett, RA Moreira, F Grunewald, ...
bioRxiv, 2024.04. 15.589479, 2024
12024
Quantitative FRET Microscopy Reveals a Crucial Role of Cytoskeleton in Promoting PI(4,5)P2 Confinement
MJ Sarmento, L Borges-Araújo, SN Pinto, N Bernardes, JC Ricardo, ...
International Journal of Molecular Sciences 22 (21), 11727, 2021
12021
Bartender: Martini 3 Bonded Terms via Quantum Mechanics-based Molecular Dynamics
GP Pereira, R Alessandri, M Domínguez, R Araya-Osorio, L Grünewald, ...
2024
Impact of Ca2+-Induced PI(4,5)P2 Clusters on PH-YFP Organization and Protein-Protein Interactions
L Borges-Araújo, ME Monteiro, D Mil-Homens, N Bernardes, ...
Biomolecules 12 (7), 912, 2022
2022
The impact of SARS-CoV-2 Omicron variant on the human ACE2 binding: a computational study
R Teixeira, M Valério, L Borges-Araújo, MN Melo, JB Vicente, D Lousa, ...
FEBS Open Bio, 260-261, 2022
2022
SARS-CoV-2 variants impact RBD conformational dynamics and ACE2 accessibility (preprint)
MF Valerio, L Borges-Araujo, MN Melo, D Lousa, C Soares
2021
Impact of Ca2+ induced PI (4, 5) P-2 clustering on the dynamics of PI (4, 5) P-2 binding proteins
L Borges-Araujo, M Monteiro, D Mil-Homens, N Bernardes, MJ Sarmento, ...
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 48, S123-S123, 2019
2019
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