| Nanopore sequencing and assembly of a human genome with ultra-long reads M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ... Nature biotechnology 36 (4), 338-345, 2018 | 1621 | 2018 |
| Binning metagenomic contigs by coverage and composition J Alneberg, BS Bjarnason, I De Bruijn, M Schirmer, J Quick, UZ Ijaz, ... Nature methods 11 (11), 1144-1146, 2014 | 1474 | 2014 |
| Real-time, portable genome sequencing for Ebola surveillance J Quick, NJ Loman, S Duraffour, JT Simpson, E Severi, L Cowley, JA Bore, ... Nature 530 (7589), 228-232, 2016 | 1308 | 2016 |
| A complete bacterial genome assembled de novo using only nanopore sequencing data NJ Loman, J Quick, JT Simpson Nature methods 12 (8), 733-735, 2015 | 1178 | 2015 |
| Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á OToole, J Southgate, ... Cell 184 (1), 64-75. e11, 2021 | 948 | 2021 |
| Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples J Quick, ND Grubaugh, ST Pullan, IM Claro, AD Smith, K Gangavarapu, ... Nature protocols 12 (6), 1261-1276, 2017 | 860 | 2017 |
| Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B. 1.617. 2) compared with alpha (B. 1.1. 7) variants of concern: a cohort study KA Twohig, T Nyberg, A Zaidi, S Thelwall, MA Sinnathamby, S Aliabadi, ... The Lancet Infectious Diseases 22 (1), 35-42, 2022 | 615 | 2022 |
| An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar ND Grubaugh, K Gangavarapu, J Quick, NL Matteson, JG De Jesus, ... Genome biology 20 (1), 1-19, 2019 | 606 | 2019 |
| Establishment and cryptic transmission of Zika virus in Brazil and the Americas NR Faria, J Quick, IM Claro, J Theze, JG de Jesus, M Giovanetti, ... Nature 546 (7658), 406-410, 2017 | 575 | 2017 |
| Telomere-to-telomere assembly of a complete human X chromosome KH Miga, S Koren, A Rhie, MR Vollger, A Gershman, A Bzikadze, ... Nature 585 (7823), 79-84, 2020 | 551 | 2020 |
| Nanopore native RNA sequencing of a human poly (A) transcriptome RE Workman, AD Tang, PS Tang, M Jain, JR Tyson, R Razaghi, ... Nature methods 16 (12), 1297-1305, 2019 | 420 | 2019 |
| Virus genomes reveal factors that spread and sustained the Ebola epidemic G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ... Nature 544 (7650), 309-315, 2017 | 404 | 2017 |
| Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B. 1.1. 7 B Meng, SA Kemp, G Papa, R Datir, IATM Ferreira, S Marelli, WT Harvey, ... Cell reports 35 (13), 109292, 2021 | 335 | 2021 |
| Genomic epidemiology reveals multiple introductions of Zika virus into the United States ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ... Nature 546 (7658), 401-405, 2017 | 332 | 2017 |
| A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104: H4 NJ Loman, C Constantinidou, M Christner, H Rohde, JZM Chan, J Quick, ... Jama 309 (14), 1502-1510, 2013 | 327 | 2013 |
| Coast-to-coast spread of SARS-CoV-2 during the early epidemic in the United States JR Fauver, ME Petrone, EB Hodcroft, K Shioda, HY Ehrlich, AG Watts, ... Cell 181 (5), 990-996. e5, 2020 | 303 | 2020 |
| Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella J Quick, P Ashton, S Calus, C Chatt, S Gossain, J Hawker, S Nair, K Neal, ... Genome biology 16 (1), 1-14, 2015 | 302 | 2015 |
| Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B. 1.1. 7: an ecological study MS Graham, CH Sudre, A May, M Antonelli, B Murray, T Varsavsky, ... The Lancet Public Health 6 (5), e335-e345, 2021 | 301 | 2021 |
| Genomic and epidemiological monitoring of yellow fever virus transmission potential NR Faria, MUG Kraemer, SC Hill, J Góes de Jesus, RS Aguiar, FCM Iani, ... Science 361 (6405), 894-899, 2018 | 276 | 2018 |
| Improvements to the ARTIC multiplex PCR method for SARS-CoV-2 genome sequencing using nanopore JR Tyson, P James, D Stoddart, N Sparks, A Wickenhagen, G Hall, ... BioRxiv, 2020 | 266 | 2020 |
Nicholas J LomanProfessor of Microbial Genomics and Bioinformatics, University of BirminghamPatvirtintas el. paštas bham.ac.uk
