David F. Green
David F. Green
Associate Professor of Applied Mathematics & Statistics, Stony Brook University
Verified email at
Cited by
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Ionic strength effects on amyloid formation by amylin are a complicated interplay among Debye screening, ion selectivity, and Hofmeister effects
PJ Marek, V Patsalo, DF Green, DP Raleigh
Biochemistry 51 (43), 8478-8490, 2012
Interpretation of p-Cyanophenylalanine Fluorescence in Proteins in Terms of Solvent Exposure and Contribution of Side-Chain Quenchers: A Combined …
H Taskent-Sezgin, J Chung, V Patsalo, SJ Miyake-Stoner, AM Miller, ...
Biochemistry 48 (38), 9040-9046, 2009
Action‐at‐a‐distance interactions enhance protein binding affinity
BA Joughin, DF Green, B Tidor
Protein science 14 (5), 1363-1369, 2005
Is There a Generalized Reverse Anomeric Effect? Substituent and Solvent Effects on the Configurational Equilibria of Neutral and Protonated N-Arylglucopyranosylamines …
KD Randell, BD Johnston, DF Green, BM Pinto
The Journal of Organic Chemistry 65 (1), 220-226, 2000
Rational modification of protein stability by targeting surface sites leads to complicated results
S Xiao, V Patsalo, B Shan, Y Bi, DF Green, DP Raleigh
Proceedings of the National Academy of Sciences 110 (28), 11337-11342, 2013
Rational design of new binding specificity by simultaneous mutagenesis of calmodulin and a target peptide
DF Green, AT Dennis, PS Fam, B Tidor, A Jasanoff
Biochemistry 45 (41), 12547-12559, 2006
Conformational preferences in glycosylamines. Implications for the exo-anomeric effect
RJ Batchelor, DF Green, BD Johnston, BO Patrick, BM Pinto
Carbohydrate Research 330 (3), 421-426, 2001
Design of improved protein inhibitors of HIV‐1 cell entry: optimization of electrostatic interactions at the binding interface
DF Green, B Tidor
Proteins: Structure, Function, and Bioinformatics 60 (4), 644-657, 2005
Energetic Decomposition with the Generalized-Born and Poisson− Boltzmann Solvent Models: Lessons from Association of G-Protein Components
N Carrascal, DF Green
The Journal of Physical Chemistry B 114 (15), 5096-5116, 2010
Evaluation of ab initio charge determination methods for use in continuum solvation calculations
DF Green, B Tidor
The Journal of Physical Chemistry B 107 (37), 10261-10273, 2003
Carbohydrate recognition by the antiviral lectin cyanovirin-N
YK Fujimoto, DF Green
Journal of the American Chemical Society 134 (48), 19639-19651, 2012
Escherichia coli glutaminyl-tRNA synthetase is electrostatically optimized for binding of its cognate substrates
DF Green, B Tidor
Journal of molecular biology 342 (2), 435-452, 2004
Computational models explain the oligosaccharide specificity of cyanovirin‐N
YK Fujimoto, RN TerBush, V Patsalo, DF Green
Protein Science 17 (11), 2008-2014, 2008
Optimized parameters for continuum solvation calculations with carbohydrates
DF Green
The Journal of Physical Chemistry B 112 (16), 5238-5249, 2008
Biophysical and functional analyses suggest that adenovirus E4-ORF3 protein requires higher-order multimerization to function against promyelocytic leukemia protein nuclear bodies
V Patsalo, MA Yondola, B Luan, I Shoshani, C Kisker, DF Green, ...
Journal of Biological Chemistry 287 (27), 22573-22583, 2012
Rational and computational design of stabilized variants of cyanovirin-N that retain affinity and specificity for glycan ligands
V Patsalo, DP Raleigh, DF Green
Biochemistry 50 (49), 10698-10712, 2011
Evaluation of electrostatic interactions
DF Green, B Tidor
Current protocols in bioinformatics 2 (1), 8.3. 1-8.3. 16, 2003
A statistical framework for hierarchical methods in molecular simulation and design
DF Green
Journal of Chemical Theory and Computation 6 (5), 1682-1697, 2010
Current protocols in bioinformatics
DF Green, B Tidor
New York, John Wiley & Sons, Inc, 2003
Direct calculation of protein fitness landscapes through computational protein design
L Au, DF Green
Biophysical journal 110 (1), 75-84, 2016
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