AMBER 22 Reference Manual DA Case, RE Duke, RC Walker, NR Skrynnikov, TE Cheatham III, ... University of California, 2022 | 12076* | 2022 |
Amber 10 DA Case, TA Darden, TE Cheatham, CL Simmerling, J Wang, RE Duke, ... University of California, 2008 | 7439* | 2008 |
Amber 10 DA Case, TA Darden, TE Cheatham, CL Simmerling, J Wang, RE Duke, ... University of California, 2008 | 7439* | 2008 |
AMBER 9 DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... University of California, San Francisco 45, 2006 | 3687 | 2006 |
AMBER 2015 DA Case, J Berryman, RM Betz, DS Cerutti, TE Cheatham Iii, TA Darden, ... University of California, 2015 | 3315 | 2015 |
Routine microsecond molecular dynamics simulations with AMBER on GPUs. 2. Explicit solvent particle mesh Ewald R Salomon-Ferrer, AW Gotz, D Poole, S Le Grand, RC Walker Journal of chemical theory and computation 9 (9), 3878-3888, 2013 | 2445 | 2013 |
An overview of the Amber biomolecular simulation package R Salomon‐Ferrer, DA Case, RC Walker Wiley Interdisciplinary Reviews: Computational Molecular Science 3 (2), 198-210, 2013 | 1877 | 2013 |
Routine microsecond molecular dynamics simulations with AMBER on GPUs. 1. Generalized born AW Gotz, MJ Williamson, D Xu, D Poole, S Le Grand, RC Walker Journal of chemical theory and computation 8 (5), 1542-1555, 2012 | 1635 | 2012 |
Routine microsecond molecular dynamics simulations with AMBER on GPUs. 1. Generalized born AW Gotz, MJ Williamson, D Xu, D Poole, S Le Grand, RC Walker Journal of chemical theory and computation 8 (5), 1542-1555, 2012 | 1635 | 2012 |
Lipid14: the amber lipid force field CJ Dickson, BD Madej, ÅA Skjevik, RM Betz, K Teigen, IR Gould, ... Journal of chemical theory and computation 10 (2), 865-879, 2014 | 1028 | 2014 |
SPFP: Speed without compromise—A mixed precision model for GPU accelerated molecular dynamics simulations S Le Grand, AW Götz, RC Walker Computer Physics Communications 184 (2), 374-380, 2013 | 868 | 2013 |
Long-time-step molecular dynamics through hydrogen mass repartitioning CW Hopkins, S Le Grand, RC Walker, AE Roitberg Journal of chemical theory and computation 11 (4), 1864-1874, 2015 | 713 | 2015 |
Amber 2021 DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ... University of California, San Francisco, 2021 | 628 | 2021 |
AMBER 10; University of California: San Francisco, 2008 DA Case, TA Darden, TE Cheatham III, CL Simmerling, J Wang, RE Duke, ... Google Scholar There is no corresponding record for this reference, 2008 | 505 | 2008 |
Routine access to millisecond time scale events with accelerated molecular dynamics LCT Pierce, R Salomon-Ferrer, C Augusto F. de Oliveira, JA McCammon, ... Journal of chemical theory and computation 8 (9), 2997-3002, 2012 | 422 | 2012 |
The implementation of a fast and accurate QM/MM potential method in Amber RC Walker, MF Crowley, DA Case Journal of computational chemistry 29 (7), 1019-1031, 2008 | 390 | 2008 |
Improved reweighting of accelerated molecular dynamics simulations for free energy calculation Y Miao, W Sinko, L Pierce, D Bucher, RC Walker, JA McCammon Journal of chemical theory and computation 10 (7), 2677-2689, 2014 | 310 | 2014 |
AMBER 14; University of California: San Francisco, 2014 DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Google Scholar There is no corresponding record for this reference, 1-826, 2014 | 292* | 2014 |
GPU-accelerated molecular dynamics and free energy methods in Amber18: performance enhancements and new features TS Lee, DS Cerutti, D Mermelstein, C Lin, S LeGrand, TJ Giese, ... Journal of chemical information and modeling 58 (10), 2043-2050, 2018 | 250 | 2018 |
Implementation of the SCC-DFTB method for hybrid QM/MM simulations within the Amber molecular dynamics package GM Seabra, RC Walker, M Elstner, DA Case, AE Roitberg The Journal of Physical Chemistry A 111 (26), 5655-5664, 2007 | 236 | 2007 |