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Stefano piana
Stefano piana
Research Fellow, DE Shaw Research
Verified email at deshaw.com
Title
Cited by
Cited by
Year
Improved side‐chain torsion potentials for the Amber ff99SB protein force field
K Lindorff‐Larsen, S Piana, K Palmo, P Maragakis, JL Klepeis, RO Dror, ...
Proteins: Structure, Function, and Bioinformatics 78 (8), 1950-1958, 2010
56212010
How fast-folding proteins fold
K Lindorff-Larsen, S Piana, RO Dror, DE Shaw
Science 334 (6055), 517-520, 2011
20442011
Atomic-level characterization of the structural dynamics of proteins
DE Shaw, P Maragakis, K Lindorff-Larsen, S Piana, RO Dror, ...
Science 330 (6002), 341-346, 2010
20402010
How robust are protein folding simulations with respect to force field parameterization?
S Piana, K Lindorff-Larsen, DE Shaw
Biophysical journal 100 (9), L47-L49, 2011
8622011
Developing a molecular dynamics force field for both folded and disordered protein states
P Robustelli, S Piana, DE Shaw
Proceedings of the National Academy of Sciences 115 (21), E4758-E4766, 2018
8362018
Systematic Validation of Protein Force Fields against Experimental Data
K Lindorff-Larsen, P Maragakis, S Piana, MP Eastwood, RO Dror, ...
PloS one 7 (2), e32131, 2012
7692012
Water dispersion interactions strongly influence simulated structural properties of disordered protein states
S Piana, AG Donchev, P Robustelli, DE Shaw
The journal of physical chemistry B 119 (16), 5113-5123, 2015
7392015
Millisecond-scale molecular dynamics simulations on Anton
DE Shaw, RO Dror, JK Salmon, JP Grossman, KM Mackenzie, JA Bank, ...
Proceedings of the conference on high performance computing networking …, 2009
6882009
A bias-exchange approach to protein folding
S Piana, A Laio
The journal of physical chemistry B 111 (17), 4553-4559, 2007
6402007
Assessing the accuracy of physical models used in protein-folding simulations: quantitative evidence from long molecular dynamics simulations
S Piana, JL Klepeis, DE Shaw
Current opinion in structural biology 24, 98-105, 2014
5382014
Identification Of Two Distinct Inactive Conformations Of The Beta-2 Adrenergic Receptor Reconciles Structural And Biochemical Observations
RO Dror, DH Arlow, DW Borhani, M Jensen, DE Shaw
Biophysical Journal 96 (3), 365a, 2009
3762009
Atomic-level description of ubiquitin folding
S Piana, K Lindorff-Larsen, DE Shaw
Proceedings of the National Academy of Sciences 110 (15), 5915-5920, 2013
3602013
Refinement of protein structure homology models via long, all‐atom molecular dynamics simulations
A Raval, S Piana, MP Eastwood, RO Dror, DE Shaw
Proteins: Structure, Function, and Bioinformatics 80 (8), 2071-2079, 2012
3312012
Protein folding kinetics and thermodynamics from atomistic simulation
S Piana, K Lindorff-Larsen, DE Shaw
Proceedings of the National Academy of Sciences 109 (44), 17845-17850, 2012
3302012
A kinetic model of trp-cage folding from multiple biased molecular dynamics simulations
F Marinelli, F Pietrucci, A Laio, S Piana
PLoS computational biology 5 (8), e1000452, 2009
3252009
Structure and dynamics of an unfolded protein examined by molecular dynamics simulation
K Lindorff-Larsen, N Trbovic, P Maragakis, S Piana, DE Shaw
Journal of the American Chemical Society 134 (8), 3787-3791, 2012
2862012
Simulating micrometre-scale crystal growth from solution
S Piana, M Reyhani, JD Gale
Nature 438 (7064), 70-73, 2005
2582005
RNA force field with accuracy comparable to state-of-the-art protein force fields
D Tan, S Piana, RM Dirks, DE Shaw
Proceedings of the National Academy of Sciences 115 (7), E1346-E1355, 2018
2372018
Structural origin of slow diffusion in protein folding
HS Chung, S Piana-Agostinetti, DE Shaw, WA Eaton
Science 349 (6255), 1504-1510, 2015
2172015
Role of conformational fluctuations in the enzymatic reaction of HIV-1 protease
S Piana, P Carloni, M Parrinello
Journal of molecular biology 319 (2), 567-583, 2002
1752002
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