Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 899 | 2016 |
A correlation algorithm for the automated quantitative analysis of shotgun proteomics data MJ MacCoss, CC Wu, H Liu, R Sadygov, JR Yates Analytical chemistry 75 (24), 6912-6921, 2003 | 325 | 2003 |
Recommendations for the generation, quantification, storage, and handling of peptides used for mass spectrometry–based assays AN Hoofnagle, JR Whiteaker, SA Carr, E Kuhn, T Liu, SA Massoni, ... Clinical chemistry 62 (1), 48-69, 2016 | 215 | 2016 |
CPTAC Assay Portal: a repository of targeted proteomic assays JR Whiteaker, GN Halusa, AN Hoofnagle, V Sharma, B MacLean, P Yan, ... Nature methods 11 (7), 703-704, 2014 | 167 | 2014 |
A comprehensive and non‐prefractionation on the protein level approach for the human urinary proteome: touching phosphorylation in urine QR Li, KX Fan, RX Li, J Dai, CC Wu, SL Zhao, JR Wu, CH Shieh, R Zeng Rapid Communications in Mass Spectrometry 24 (6), 823-832, 2010 | 88 | 2010 |
Dysfunction of PLA2G6 and CYP2C44-associated network signals imminent carcinogenesis from chronic inflammation to hepatocellular carcinoma M Li, C Li, WX Liu, C Liu, J Cui, Q Li, H Ni, Y Yang, C Wu, C Chen, X Zhen, ... Journal of molecular cell biology 9 (6), 489-503, 2017 | 55 | 2017 |
Contributions of immunoaffinity chromatography to deep proteome profiling of human biofluids C Wu, J Duan, T Liu, RD Smith, WJ Qian Journal of Chromatography B 1021, 57-68, 2016 | 55 | 2016 |
Using the CPTAC assay portal to identify and implement highly characterized targeted proteomics assays JR Whiteaker, GN Halusa, AN Hoofnagle, V Sharma, B MacLean, P Yan, ... Quantitative Proteomics by Mass Spectrometry, 223-236, 2016 | 44 | 2016 |
Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis T Shi, TL Fillmore, Y Gao, R Zhao, J He, AA Schepmoes, CD Nicora, ... Analytical chemistry 85 (19), 9196-9203, 2013 | 43 | 2013 |
Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer E Song, Y Gao, C Wu, T Shi, S Nie, TL Fillmore, AA Schepmoes, ... Scientific data 4 (1), 1-13, 2017 | 39 | 2017 |
Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment T Shi, Y Gao, MJ Gaffrey, CD Nicora, TL Fillmore, WB Chrisler, ... Analytical chemistry 87 (2), 1103-1110, 2015 | 32 | 2015 |
Comprehensive quantitative analysis of ovarian and breast cancer tumor peptidomes Z Xu, C Wu, F Xie, GW Slysz, N Tolic, ME Monroe, VA Petyuk, SH Payne, ... Journal of proteome research 14 (1), 422-433, 2015 | 32 | 2015 |
Expediting SRM assay development for large-scale targeted proteomics experiments C Wu, T Shi, JN Brown, J He, Y Gao, TL Fillmore, AK Shukla, RJ Moore, ... Journal of proteome research 13 (10), 4479-4487, 2014 | 32 | 2014 |
Proteomic mining in the dysplastic liver of WHV/c‐myc mice – insights and indicators for early hepatocarcinogenesis Y Liu, C Li, Z Xing, X Yuan, Y Wu, M Xu, K Tu, Q Li, C Wu, M Zhao, R Zeng The FEBS Journal 277 (19), 4039-4053, 2010 | 32 | 2010 |
Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods J He, AA Schepmoes, T Shi, C Wu, TL Fillmore, Y Gao, RD Smith, ... Journal of translational medicine 13, 1-14, 2015 | 30 | 2015 |
Delicate analysis of post-translational modifications on Dishevelled 3 C Wu, W Wei, C Li, Q Li, Q Sheng, R Zeng Journal of proteome research 11 (7), 3829-3837, 2012 | 15 | 2012 |
Preconditioning in the rhesus macaque induces a proteomic signature following cerebral ischemia that is associated with neuroprotection SL Stevens, T Liu, FR Bahjat, VA Petyuk, AA Schepmoes, RL Sontag, ... Translational stroke research 10, 440-448, 2019 | 11 | 2019 |
An optimized informatics pipeline for mass spectrometry-based peptidomics C Wu, ME Monroe, Z Xu, GW Slysz, SH Payne, KD Rodland, T Liu, ... Journal of the American Society for Mass Spectrometry 26 (12), 2002-2008, 2015 | 11 | 2015 |
Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics H Wang, CE Barbieri, J He, Y Gao, T Shi, C Wu, AA Schepmoes, ... Journal of translational medicine 15, 1-10, 2017 | 10 | 2017 |
Accounting for population variation in targeted proteomics GM Fujimoto, ME Monroe, L Rodriguez, C Wu, B MacLean, RD Smith, ... Journal of proteome research 13 (1), 321-323, 2014 | 6 | 2014 |