| Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 115 | 2019 |
| Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1800-1823, 2021 | 78 | 2021 |
| IRaPPA: information retrieval based integration of biophysical models for protein assembly selection IH Moal, D Barradas-Bautista, B Jiménez-García, M Torchala, ... Bioinformatics 33 (12), 1806-1813, 2017 | 36 | 2017 |
| Understanding High-Salt and Cold Adaptation of a Polyextremophilic Enzyme MR Karan, Ram, Sam Mathew, Reyhan Muhammad, Didier B. Bautista, Malvina ... Microorganisms 8 (10), 1594, 2020 | 35 | 2020 |
| Structural prediction of protein–protein interactions by docking: Application to biomedical problems D Barradas-Bautista, M Rosell, C Pallara, J Fernández-Recio Advances in protein chemistry and structural biology 110, 203-249, 2018 | 21 | 2018 |
| DIFERENTIAL DNA SYNTHESIS IN Anopheles albimanus TISSUES INDUCED BY IMMUNE CHALLENGE WITH DIFFERENT MICROORGANISMS S Hernández‐Martínez, D Barradas‐Bautista, MH Rodríguez Archives of Insect Biochemistry and Physiology 84 (1), 1-14, 2013 | 21 | 2013 |
| Cancer growth and metastasis as a metaphor of Go gaming: An Ising model approach D Barradas-Bautista, M Alvarado-Mentado, M Agostino, G Cocho PloS one 13 (5), e0195654, 2018 | 17 | 2018 |
| Cell‐to‐cell and type‐to‐type heterogeneity of signaling networks: insights from the crowd A Gabor, M Tognetti, A Driessen, J Tanevski, B Guo, W Cao, H Shen, T Yu, ... Molecular systems biology 17 (10), e10402, 2021 | 14 | 2021 |
| A systematic analysis of scoring functions in rigid‐body protein docking: the delicate balance between the predictive rate improvement and the risk of overtraining D Barradas‐Bautista, IH Moal, J Fernández‐Recio Proteins: Structure, Function, and Bioinformatics 85 (7), 1287-1297, 2017 | 14 | 2017 |
| Impact of AlphaFold on structure prediction of protein complexes: the CASP15‐CAPRI experiment MF Lensink, G Brysbaert, N Raouraoua, PA Bates, M Giulini, RV Honorato, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1658-1683, 2023 | 12 | 2023 |
| A random forest classifier for protein–protein docking models D Barradas-Bautista, Z Cao, A Vangone, R Oliva, L Cavallo Bioinformatics Advances 2 (1), vbab042, 2022 | 11 | 2022 |
| Docking-based modeling of protein-protein interfaces for extensive structural and functional characterization of missense mutations D Barradas-Bautista, J Fernandez-Recio PloS one 12 (8), e0183643, 2017 | 9 | 2017 |
| The CASP13-CAPRI targets as case studies to illustrate a novel scoring pipeline integrating CONSRANK with clustering and interface analyses D Barradas-Bautista, Z Cao, L Cavallo, R Oliva BMC bioinformatics 21, 1-18, 2020 | 6 | 2020 |
| Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study H Schweke, Q Xu, G Tauriello, L Pantolini, T Schwede, F Cazals, ... Proteomics 23 (17), 2200323, 2023 | 5 | 2023 |
| The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions B Jiménez-García, J Roel-Touris, D Barradas-Bautista Nucleic Acids Research 51 (W1), W298-W304, 2023 | 4 | 2023 |
| Modeling the game of go by ising Hamiltonian, deep belief networks and common fate graphs A Rojas-Domínguez, D Barradas-Baustista, M Alvarado IEEE Access 7, 120117-120127, 2019 | 4 | 2019 |
| Improving classification of correct and incorrect protein–protein docking models by augmenting the training set D Barradas-Bautista, A Almajed, R Oliva, P Kalnis, L Cavallo Bioinformatics Advances 3 (1), vbad012, 2023 | 1 | 2023 |
| A protein-protein docking decoys set from three different rigid body methods D Barradas Bautista, Z Cao, A Vangone, R Oliva, L Cavallo Zenodo, 2020 | 1 | 2020 |
| Docking through Democracy Re-ranking protein-protein decoys with a voting system D Barradas-Bautista, IH Moal, J Fernández-Recio Book of abstracts, 88-88, 2015 | 1 | 2015 |
| A dataset of protein-protein docking decoys from DIPS, analyzed with CCharppi D Barradas Bautista KAUST Research Repository, 2023 | | 2023 |
