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Manuel N. Melo
Manuel N. Melo
ITQB NOVA
Verified email at itqb.unl.pt - Homepage
Title
Cited by
Cited by
Year
MDAnalysis: a Python package for the rapid analysis of molecular dynamics simulations
RJ Gowers, M Linke, J Barnoud, TJE Reddy, MN Melo, SL Seyler, ...
Los Alamos National lab.(LANL), Los Alamos, NM (United States), 2019
11712019
Lipid organization of the plasma membrane
HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ...
Journal of the american chemical society 136 (41), 14554-14559, 2014
8812014
Antimicrobial peptides: linking partition, activity and high membrane-bound concentrations
MN Melo, R Ferre, MARB Castanho
Nature Reviews Microbiology 7 (3), 245-250, 2009
8022009
Cell-penetrating peptides and antimicrobial peptides: how different are they?
ST Henriques, MN Melo, MARB Castanho
Biochemical Journal 399 (1), 1-7, 2006
5142006
Dry Martini, a coarse-grained force field for lipid membrane simulations with implicit solvent
C Arnarez, JJ Uusitalo, MF Masman, HI Ingólfsson, DH De Jong, MN Melo, ...
Journal of chemical theory and computation 11 (1), 260-275, 2015
2992015
Lipid–protein interactions are unique fingerprints for membrane proteins
V Corradi, E Mendez-Villuendas, HI Ingólfsson, RX Gu, I Siuda, MN Melo, ...
ACS central science 4 (6), 709-717, 2018
2912018
Escherichia coli cell surface perturbation and disruption induced by antimicrobial peptides BP100 and pepR
CS Alves, MN Melo, HG Franquelim, R Ferre, M Planas, L Feliu, E Bardají, ...
Journal of Biological Chemistry 285 (36), 27536-27544, 2010
2652010
Pitfalls of the Martini model
R Alessandri, PCT Souza, S Thallmair, MN Melo, AH De Vries, SJ Marrink
Journal of chemical theory and computation 15 (10), 5448-5460, 2019
1862019
Ceramides bind VDAC2 to trigger mitochondrial apoptosis
S Dadsena, S Bockelmann, JGM Mina, DG Hassan, S Korneev, ...
Nature communications 10 (1), 1832, 2019
1712019
Hsc70-4 deforms membranes to promote synaptic protein turnover by endosomal microautophagy
V Uytterhoeven, E Lauwers, I Maes, K Miskiewicz, MN Melo, J Swerts, ...
Neuron 88 (4), 735-748, 2015
1702015
Parameters for Martini sterols and hopanoids based on a virtual-site description
MN Melo, HI Ingólfsson, SJ Marrink
The Journal of chemical physics 143 (24), 2015
1502015
Synergistic effects of the membrane actions of cecropin-melittin antimicrobial hybrid peptide BP100
R Ferre, MN Melo, AD Correia, L Feliu, E Bardají, M Planas, M Castanho
Biophysical journal 96 (5), 1815-1827, 2009
1212009
Using zeta-potential measurements to quantify peptide partition to lipid membranes
JM Freire, MM Domingues, J Matos, MN Melo, AS Veiga, NC Santos, ...
European biophysics journal 40, 481-487, 2011
1142011
Omiganan pentahydrochloride in the front line of clinical applications of antimicrobial peptides
MN Melo, D Dugourd, MARB Castanho
Recent patents on anti-infective drug discovery 1 (2), 201-207, 2006
1072006
Two decades of Martini: Better beads, broader scope
SJ Marrink, L Monticelli, MN Melo, R Alessandri, DP Tieleman, ...
Wiley Interdisciplinary Reviews: Computational Molecular Science 13 (1), e1620, 2023
1002023
Adaptive resolution simulation of an atomistic protein in MARTINI water
J Zavadlav, MN Melo, SJ Marrink, M Praprotnik
The Journal of chemical physics 140 (5), 2014
972014
Exchange pathways of plastoquinone and plastoquinol in the photosystem II complex
FJ Van Eerden, MN Melo, PWJM Frederix, X Periole, SJ Marrink
Nature communications 8 (1), 15214, 2017
912017
Omiganan interaction with bacterial membranes and cell wall models. Assigning a biological role to saturation
MN Melo, MARB Castanho
Biochimica et Biophysica Acta (BBA)-Biomembranes 1768 (5), 1277-1290, 2007
812007
Adaptive resolution simulation of MARTINI solvents
J Zavadlav, MN Melo, AV Cunha, AH De Vries, SJ Marrink, M Praprotnik
Journal of Chemical Theory and Computation 10 (6), 2591-2598, 2014
642014
Interaction of the dengue virus fusion peptide with membranes assessed by NMR: the essential role of the envelope protein Trp101 for membrane fusion
MN Melo, FJR Sousa, FA Carneiro, MARB Castanho, AP Valente, ...
Journal of Molecular Biology 392 (3), 736-746, 2009
632009
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Articles 1–20