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Gongyi Hong
Gongyi Hong
AFRL research scientist (on site contractor)
Verified email at us.af.mil
Title
Cited by
Cited by
Year
Frozen density functional free energy simulations of redox proteins: computational studies of the reduction potential of plastocyanin and rusticyanin
MHM Olsson, G Hong, A Warshel
Journal of the American Chemical Society 125 (17), 5025-5039, 2003
2782003
The Beijing four-component density functional program package (BDF) and its application to EuO, EuS, YbO and YbS
W Liu, G Hong, D Dai, L Li, M Dolg
Theoretical Chemistry Accounts 96, 75-83, 1997
2621997
Ab initio QM/MM simulation with proper sampling:“first principle” calculations of the free energy of the autodissociation of water in aqueous solution
M Štrajbl, G Hong, A Warshel
The Journal of Physical Chemistry B 106 (51), 13333-13343, 2002
1862002
Using the constrained DFT approach in generating diabatic surfaces and off diagonal empirical valence bond terms for modeling reactions in condensed phases
G Hong, E Rosta, A Warshel
The Journal of Physical Chemistry B 110 (39), 19570-19574, 2006
1292006
Design parameters for tuning the type 1 Cu multicopper oxidase redox potential: insight from a combination of first principles and empirical molecular dynamics simulations
G Hong, DM Ivnitski, GR Johnson, P Atanassov, R Pachter
Journal of the American Chemical Society 133 (13), 4802-4809, 2011
1072011
Toward understanding amino acid adsorption at metallic interfaces: a density functional theory study
G Hong, H Heinz, RR Naik, BL Farmer, R Pachter
ACS applied materials & interfaces 1 (2), 388-392, 2009
932009
A comparison of scalar-relativistic ZORA and DKH density functional schemes: monohydrides, monooxides and monofluorides of La, Lu, Ac and Lr
G Hong, M Dolg, L Li
Chemical physics letters 334 (4-6), 396-402, 2001
872001
Ab Initio Study of Metal−Ring Bonding in the Bis(η6-benzene)lanthanide and -actinide Complexes M(C6H6)2 (M = La, Ce, Nd, Gd, Tb, Lu, Th, U)
G Hong, F Schautz, M Dolg
Journal of the American Chemical Society 121 (7), 1502-1512, 1999
791999
Constraining the electron densities in DFT method as an effective way for ab initio studies of metal‐catalyzed reactions
G Hong, M Strajbl, TA Wesolowski, A Warshel
Journal of Computational Chemistry 21 (16), 1554-1561, 2000
672000
Electronic properties of a graphene device with peptide adsorption: insight from simulation
B Akdim, R Pachter, SS Kim, RR Naik, TR Walsh, S Trohalaki, G Hong, ...
ACS applied materials & interfaces 5 (15), 7470-7477, 2013
652013
On understanding proton transfer to the biocatalytic [Fe―Fe] H sub-cluster in [Fe―Fe] H2ases: QM/MM MD simulations
G Hong, AJ Cornish, EL Hegg, R Pachter
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1807 (5), 510-517, 2011
572011
A study of HeI photoelectron spectroscopy on the electronic structure of the nitrate free radical NO3
D Wang, P Jiang, X Qian, G Hong
The Journal of chemical physics 106 (8), 3003-3006, 1997
531997
Scalar‐relativistic density functional and ab initio pseudopotential study of zero‐valent d and f metal bis‐η6‐benzene sandwich complexes M(C6H6)2 (M = Sc …
G Hong, M Dolg, L Li
International Journal of Quantum Chemistry 80 (2), 201-209, 2000
442000
A simplified scheme for relativistic density functional computation in the zeroth-order regular approximation
F Wang, G Hong, L Li
Chemical Physics Letters 316 (3-4), 318-323, 2000
322000
Inhibition of biocatalysis in [Fe–Fe] hydrogenase by oxygen: molecular dynamics and density functional theory calculations
G Hong, R Pachter
ACS chemical biology 7 (7), 1268-1275, 2012
312012
Biophysical properties of membrane-active peptides based on micelle modeling: a case study of cell-penetrating and antimicrobial peptides
Q Wang, G Hong, GR Johnson, R Pachter, MS Cheung
The journal of physical chemistry B 114 (43), 13726-13735, 2010
292010
Bound Flavin–Cytochrome Model of Extracellular Electron Transfer in Shewanella oneidensis: Analysis by Free Energy Molecular Dynamics Simulations
G Hong, R Pachter
The Journal of Physical Chemistry B 120 (25), 5617-5624, 2016
252016
The Electronic Structure of the (CH3)2N Radical and the Pyrolysis Mechanism of Dimethylnitrosamine:  A HeI Photoelectron Spectroscopic Study
Q Chunhua, H Gongyi, W Dianxun
The Journal of Physical Chemistry A 103 (13), 1972-1975, 1999
251999
The error due to neglecting the core spin–orbit splitting in valence ZORA calculations with frozen core approximation and its elimination
F Wang, G Hong, L Li
Chemical Physics 263 (2-3), 271-278, 2001
132001
Linkage isomerism and the relativistic effect in interaction of lanthanoid and carbon monoxide
G Hong, X Lin, L Li, G Xu
The Journal of Physical Chemistry A 101 (49), 9314-9317, 1997
131997
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Articles 1–20