Salvatore Cosentino

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Ole LundTechnical University of DenmarkPatvirtintas el. paštas dtu.dk
Frank AarestrupTechnical University of Denmark, DTUPatvirtintas el. paštas food.dtu.dk
Mette Voldby LarsenPatvirtintas el. paštas goseqit.com
Henrik HasmanStatens Serum InstitutPatvirtintas el. paštas hasman.dk
Simon RasmussenProfessor, University of CopenhagenPatvirtintas el. paštas sund.ku.dk
Ea ZankariPatvirtintas el. paštas cbs.dtu.dk
Thomas Sicheritz-PontenProfessor in Computational Phage Biodiscovery, University of CopenhagenPatvirtintas el. paštas sund.ku.dk
Dave UsseryProfessor, Department of BioMedical Informatics, UAMSPatvirtintas el. paštas uams.edu
Lars JelsbakProfessor at the Technical University of Denmark (DTU Bioengineering)Patvirtintas el. paštas bio.dtu.dk
Wataru IwasakiProfessor, Department of Integrated Biosciences, the University of TokyoPatvirtintas el. paštas k.u-tokyo.ac.jp
Dhany SaputraPhD student, Center for Biological Sequence Analysis, Technical University of DenmarkPatvirtintas el. paštas cbs.dtu.dk
Oksana LukjancenkoClinical Microbiomics A/SPatvirtintas el. paštas clinical-microbiomics.com
Christophe DessimozProfessor at UNIL and Director of SIB Swiss Institute of BioinformaticsPatvirtintas el. paštas unil.ch
Natasha GloverSwiss Institute of Bioinformatics, University of LausannePatvirtintas el. paštas unil.ch
Erik SonnhammerProfessor of Bioinformatics, DBB Stockholm University, Science for Life LaboratoryPatvirtintas el. paštas scilifelab.se
Odile LecompteProfessor of Bioinformatics and Genomics, University of Strasbourg, ICUBEPatvirtintas el. paštas unistra.fr
Yannis NeversUniversity of LausannePatvirtintas el. paštas unil.ch
Paul D ThomasProfessor, University of Southern CaliforniaPatvirtintas el. paštas usc.edu
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA-CSIC), Madrid, SpainPatvirtintas el. paštas embl.de
Steve KellyUniversity of OxfordPatvirtintas el. paštas plants.ox.ac.uk

Stebėti

Salvatore Cosentino

Research Associate, Graduate School of Frontier Sciences, The University of Tokyo

Patvirtintas el. paštas k.u-tokyo.ac.jp - Pagrindinis puslapis

Bioinformatics computer science machine learning data analysis


Pavadinimas Rūšiuoti pagal šaltinius Rūšiuoti pagal metus Rūšiuoti pagal pavadinimą	Cituota Cituota	Metai
Identification of acquired antimicrobial resistance genes E Zankari, H Hasman, S Cosentino, M Vestergaard, S Rasmussen, ... Journal of antimicrobial chemotherapy 67 (11), 2640-2644, 2012	5055	2012
Multilocus sequence typing of total-genome-sequenced bacteria MV Larsen, S Cosentino, S Rasmussen, C Friis, H Hasman, RL Marvig, ... Journal of clinical microbiology 50 (4), 1355-1361, 2012	2324	2012
PathogenFinder-distinguishing friend from foe using bacterial whole genome sequence data S Cosentino, M Voldby Larsen, F Møller Aarestrup, O Lund PloS one 8 (10), e77302, 2013	537	2013
Benchmarking of methods for genomic taxonomy MV Larsen, S Cosentino, O Lukjancenko, D Saputra, S Rasmussen, ... Journal of clinical microbiology 52 (5), 1529-1539, 2014	359	2014
SonicParanoid: fast, accurate and easy orthology inference S Cosentino, W Iwasaki Bioinformatics 35 (1), 149-151, 2019	122	2019
The Quest for Orthologs benchmark service and consensus calls in 2020 AM Altenhoff, J Garrayo-Ventas, S Cosentino, D Emms, NM Glover, ... Nucleic acids research 48 (W1), W538-W545, 2020	45	2020
The Quest for Orthologs orthology benchmark service in 2022 Y Nevers, TEM Jones, D Jyothi, B Yates, M Ferret, L Portell-Silva, L Codo, ... Nucleic Acids Research 50 (W1), W623-W632, 2022	44	2022
Ten Years of Collaborative Progress in the Quest for Orthologs T Linard, Benjamin and Ebersberger, Ingo and McGlynn, Shawn E and Glover ... Molecular Biology and Evolution 38 (8), 3033–3045, 2021	35	2021
The CGE tool box MV Larsen, KG Joensen, E Zankari, J Ahrenfeldt, O Lukjancenko, ... Applied Genomics of Foodborne Pathogens, 65-90, 2017	10	2017
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models S Cosentino, S Sriswasdi, W Iwasaki Genome Biology 25 (1), 195, 2024	6	2024
Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years M Anda, S Yamanouchi, S Cosentino, M Sakamoto, M Ohkuma, ... Nature Communications 14 (1), 7232, 2023	6	2023
Quest for Orthologs in the Era of Biodiversity Genomics F Langschied, N Bordin, S Cosentino, D Fuentes-Palacios, N Glover, ... Genome Biology and Evolution, evae224, 2024	1	2024
SonicParanoid: extremely fast, accurate, and easy orthology inference S Cosentino, W Iwasaki Bioinformatics. https://doi. org/10.1093/bioinformatics/bty631, 2018	1	2018
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models S Cosentino, W Iwasaki bioRxiv, 2023.05. 14.540736, 2023		2023
The Good, the Bad and the Deadly: Characterisation of bacteria through DNA analysis S Cosentino, MV Larsen, O Lund Technical University of DenmarkDanmarks Tekniske Universitet, Department of …, 2014		2014

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