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Robert K Brunner
Robert K Brunner
Verified email at illinois.edu
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Year
NAMD2: greater scalability for parallel molecular dynamics
L Kalé, R Skeel, M Bhandarkar, R Brunner, A Gursoy, N Krawetz, ...
Journal of Computational Physics 151 (1), 283-312, 1999
29631999
namd User’s Guide
M Bhandarkar, R Brunner, C Chipot, A Dalke, S Dixit, P Grayson, ...
Urbana 51, 61801, 2003
642003
Handling application-induced load imbalance using parallel objects
RK Brunner, LV Kalé
Parallel and Distributed Computing for Symbolic and Irregular Applications …, 2000
612000
Run-time support for adaptive load balancing
MA Bhandarkar, RK Brunner, LV Kalé
Parallel and Distributed Processing: 15 IPDPS 2000 Workshops Cancun, Mexico …, 2000
552000
NAMD: A case study in multilingual parallel programming
LV Kalé, M Bhandarkar, R Brunner, N Krawetz, J Phillips, A Shinozaki
Languages and Compilers for Parallel Computing: 10th International Workshop …, 1998
531998
Modeling transport through synthetic nanopores
A Aksimentiev, RK Brunner, E Cruz-Chu, J Comer, K Schulten
IEEE nanotechnology magazine 3 (1), 20-28, 2009
522009
Load balancing in parallel molecular dynamics
LV Kalé, M Bhandarkar, R Brunner
Solving Irregularly Structured Problems in Parallel: 5th International …, 1998
501998
Adapting to load on workstation clusters
RK Brunner, LV Kalé
Proceedings. Frontiers' 99. Seventh Symposium on the Frontiers of Massively …, 1999
461999
NAMD user’s guide version 2.5
M Bhandarkar, R Brunner, C Chipot, A Dalke, S Dixit, P Grayson, ...
Theoretical biophysics group, University of Illinois and Beckman Institute 405, 2009
402009
Computer Modeling in Biotechnology: A Partner in Development
A Aksimentiev, R Brunner, J Cohen, J Comer, E Cruz-Chu, D Hardy, ...
Nanostructure Design: Methods and Protocols, 181-234, 2008
372008
Scalable molecular dynamics for large biomolecular systems
RK Brunner, JC Phillips
Scientific Programming 8 (3), 195-207, 2000
362000
Multiparadigm, multilingual interoperability: Experience with converse
LV Kalé, M Bhandarkar, R Brunner, J Yelon
Parallel and Distributed Processing: 10 IPPS/SPDP'98 Workshops Held in …, 1998
271998
Workload analysis of blue waters
MD Jones, JP White, M Innus, RL DeLeon, N Simakov, JT Palmer, ...
arXiv preprint arXiv:1703.00924, 2017
262017
Topology-aware job scheduling strategies for torus networks
J Enos, G Bauer, R Brunner, S Islam, RA Fiedler, M Steed, D Jackson
Proceedings of the Cray User Group, 2014
232014
Avoiding algorithmic obfuscation in a message-driven parallel MD code
JC Phillips, R Brunner, A Shinozaki, M Bhandarkar, N Krawetz, A Gursoy, ...
Computational Molecular Dynamics: Challenges, Methods, Ideas: Proceedings of …, 1999
151999
Challenges of workload analysis on large HPC systems: A case study on NCSA blue waters
JP White, M Innus, MD Jones, RL DeLeon, N Simakov, JT Palmer, ...
Proceedings of the Practice and Experience in Advanced Research Computing …, 2017
72017
Updating the SPP benchmark suite for extreme-scale systems
G Bauer, V Anisimov, G Arnold, B Bode, R Brunner, T Cortese, R Haas, ...
Proceedings of Cry User Group Meeting (CUG-2017), 2017
72017
Application performance of a Linux cluster using Converse
L Kałé, R Brunner, J Phillips, K Varadarajan
Parallel and Distributed Processing: 11th IPPS/SPDP’99 Workshops Held in …, 1999
61999
Branch and bound based load balancing for parallel applications
S Radhakrishnan, RK Brunner, LV Kalé
Computing in Object-Oriented Parallel Environments: Third International …, 1999
41999
NAMD Programming Guide
R Brunner, A Dalke, A Gursoy, W Humphrey, M Nelson
University of Illinois and Beckman Institute, v1, 1998
31998
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